Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sox3P53784 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sox3P53784 Gm20454-201ENSMUST00000172713 221 ntBASIC6.52□□□□□ -1.37
Sox3P53784 Gm6726-201ENSMUST00000172786 681 ntBASIC6.52□□□□□ -1.37
Sox3P53784 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sox3P53784 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox3P53784 Gm37295-201ENSMUST00000192186 109 ntBASIC6.52□□□□□ -1.37
Sox3P53784 Gm44342-201ENSMUST00000196874 129 ntBASIC6.52□□□□□ -1.37
Sox3P53784 Gm44383-201ENSMUST00000198940 129 ntBASIC6.52□□□□□ -1.37
Sox3P53784 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.52□□□□□ -1.37
Sox3P53784 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.52□□□□□ -1.37
Sox3P53784 Gm38840-201ENSMUST00000204716 843 ntBASIC6.52□□□□□ -1.37
Sox3P53784 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.52□□□□□ -1.37
Sox3P53784 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC6.52□□□□□ -1.37
Sox3P53784 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC6.52□□□□□ -1.37
Sox3P53784 AV026068-219ENSMUST00000224148 933 ntBASIC6.52□□□□□ -1.37
Sox3P53784 CT025598.1-201ENSMUST00000225140 427 ntBASIC6.52□□□□□ -1.37
Sox3P53784 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox3P53784 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.52□□□□□ -1.37
Sox3P53784 Gm44916-201ENSMUST00000208664 2194 ntBASIC6.52□□□□□ -1.37
Sox3P53784 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sox3P53784 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.52□□□□□ -1.37
Sox3P53784 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sox3P53784 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sox3P53784 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.52□□□□□ -1.37
Sox3P53784 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox3P53784 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox3P53784 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sox3P53784 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox3P53784 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox3P53784 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox3P53784 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC6.52□□□□□ -1.37
Sox3P53784 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sox3P53784 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.51□□□□□ -1.37
Sox3P53784 Klf5-202ENSMUST00000226784 2852 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Sox3P53784 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Sox3P53784 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Sox3P53784 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sox3P53784 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sox3P53784 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sox3P53784 Gm23979-201ENSMUST00000104071 128 ntBASIC6.51□□□□□ -1.37
Sox3P53784 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.51□□□□□ -1.37
Sox3P53784 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Gm13754-201ENSMUST00000120486 998 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Gm12540-201ENSMUST00000121938 319 ntBASIC6.51□□□□□ -1.37
Sox3P53784 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.51□□□□□ -1.37
Sox3P53784 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Gm25969-201ENSMUST00000157166 132 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Gm17149-201ENSMUST00000164712 375 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Sox3P53784 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC6.51□□□□□ -1.37
Sox3P53784 Gm27018-201ENSMUST00000181136 225 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.51□□□□□ -1.37
Sox3P53784 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.51□□□□□ -1.37
Sox3P53784 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.51□□□□□ -1.37
Sox3P53784 Gm4556-201ENSMUST00000217808 355 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Gm18040-201ENSMUST00000217922 827 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Gm19340-201ENSMUST00000221995 345 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.51□□□□□ -1.37
Sox3P53784 CT009713.1-201ENSMUST00000224828 853 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.51□□□□□ -1.37
Sox3P53784 AC166574.7-201ENSMUST00000228502 704 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Sox3P53784 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.51□□□□□ -1.37
Sox3P53784 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Gm42837-201ENSMUST00000197071 2829 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
Sox3P53784 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 Gm44704-201ENSMUST00000208963 1990 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.51□□□□□ -1.37
Sox3P53784 AC121286.2-201ENSMUST00000218069 2470 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox3P53784 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.51□□□□□ -1.37
Sox3P53784 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC6.5□□□□□ -1.37
Sox3P53784 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.5□□□□□ -1.37
Sox3P53784 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sox3P53784 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms