Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm8869-201ENSMUST00000195222 947 ntBASIC10.23□□□□□ -0.77
Cux1P53564 Gm18290-201ENSMUST00000202900 844 ntBASIC10.23□□□□□ -0.77
Cux1P53564 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC10.23□□□□□ -0.77
Cux1P53564 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC10.23□□□□□ -0.77
Cux1P53564 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC10.23□□□□□ -0.77
Cux1P53564 Zfp850-201ENSMUST00000099111 941 ntBASIC10.23□□□□□ -0.77
Cux1P53564 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Cux1P53564 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Cux1P53564 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cux1P53564 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC10.22□□□□□ -0.77
Cux1P53564 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Cux1P53564 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Cux1P53564 Gm28112-201ENSMUST00000190898 1875 ntBASIC10.22□□□□□ -0.77
Cux1P53564 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cux1P53564 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC10.22□□□□□ -0.77
Cux1P53564 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cux1P53564 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cux1P53564 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cux1P53564 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cux1P53564 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cux1P53564 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cux1P53564 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cux1P53564 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cux1P53564 Gm11976-201ENSMUST00000119236 295 ntBASIC10.22□□□□□ -0.77
Cux1P53564 Mup-ps16-201ENSMUST00000120085 596 ntBASIC10.22□□□□□ -0.77
Cux1P53564 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cux1P53564 Mir7037-201ENSMUST00000184414 65 ntBASIC10.22□□□□□ -0.77
Cux1P53564 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC10.22□□□□□ -0.77
Cux1P53564 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC10.22□□□□□ -0.77
Cux1P53564 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC10.22□□□□□ -0.77
Cux1P53564 Gm9321-201ENSMUST00000221179 778 ntBASIC10.22□□□□□ -0.77
Cux1P53564 Gm19195-201ENSMUST00000222018 511 ntBASIC10.22□□□□□ -0.77
Cux1P53564 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cux1P53564 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC10.22□□□□□ -0.77
Cux1P53564 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cux1P53564 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cux1P53564 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cux1P53564 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cux1P53564 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cux1P53564 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cux1P53564 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cux1P53564 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cux1P53564 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cux1P53564 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Cux1P53564 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cux1P53564 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cux1P53564 Gm38178-201ENSMUST00000194502 2471 ntBASIC10.21□□□□□ -0.77
Cux1P53564 Gm28322-201ENSMUST00000185627 1475 ntBASIC10.21□□□□□ -0.77
Cux1P53564 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cux1P53564 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Cux1P53564 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cux1P53564 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cux1P53564 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cux1P53564 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cux1P53564 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cux1P53564 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cux1P53564 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cux1P53564 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cux1P53564 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cux1P53564 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC10.21□□□□□ -0.78
Cux1P53564 Mir7220-201ENSMUST00000183978 60 ntBASIC10.21□□□□□ -0.78
Cux1P53564 Gm27210-201ENSMUST00000184263 402 ntBASIC10.21□□□□□ -0.78
Cux1P53564 Mir6361-201ENSMUST00000185079 101 ntBASIC10.21□□□□□ -0.78
Cux1P53564 Gm6119-201ENSMUST00000193443 1206 ntBASIC10.21□□□□□ -0.78
Cux1P53564 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC10.21□□□□□ -0.78
Cux1P53564 Gm44239-201ENSMUST00000204228 271 ntBASIC10.21□□□□□ -0.78
Cux1P53564 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cux1P53564 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC10.21□□□□□ -0.78
Cux1P53564 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Cux1P53564 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cux1P53564 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cux1P53564 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cux1P53564 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cux1P53564 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cux1P53564 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Cux1P53564 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cux1P53564 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Cux1P53564 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cux1P53564 Slco6b1-202ENSMUST00000178359 1778 ntBASIC10.2□□□□□ -0.78
Cux1P53564 Gm42653-201ENSMUST00000200644 2839 ntBASIC10.2□□□□□ -0.78
Cux1P53564 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cux1P53564 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Cux1P53564 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cux1P53564 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cux1P53564 Gm8872-201ENSMUST00000197475 1341 ntBASIC10.2□□□□□ -0.78
Cux1P53564 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Cux1P53564 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cux1P53564 Gm23440-201ENSMUST00000104299 130 ntBASIC10.2□□□□□ -0.78
Cux1P53564 Gm12618-201ENSMUST00000121754 483 ntBASIC10.2□□□□□ -0.78
Cux1P53564 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC10.2□□□□□ -0.78
Cux1P53564 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cux1P53564 Gm45734-201ENSMUST00000211916 411 ntBASIC10.2□□□□□ -0.78
Cux1P53564 AC154718.1-201ENSMUST00000226676 250 ntBASIC10.2□□□□□ -0.78
Cux1P53564 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Cux1P53564 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cux1P53564 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cux1P53564 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Cux1P53564 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cux1P53564 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC10.2□□□□□ -0.78
Cux1P53564 Gm42568-201ENSMUST00000195639 1841 ntBASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms