Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm14840-201ENSMUST00000122135 594 ntBASIC7.29□□□□□ -1.24
Shmt1P50431 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC7.29□□□□□ -1.24
Shmt1P50431 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Shmt1P50431 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Gm23891-201ENSMUST00000158114 138 ntBASIC7.29□□□□□ -1.24
Shmt1P50431 Gm8550-201ENSMUST00000161621 653 ntBASIC7.29□□□□□ -1.24
Shmt1P50431 Gm16147-201ENSMUST00000162143 373 ntBASIC7.29□□□□□ -1.24
Shmt1P50431 Gm7289-201ENSMUST00000168993 734 ntBASIC7.29□□□□□ -1.24
Shmt1P50431 Gm6004-201ENSMUST00000173237 1116 ntBASIC7.29□□□□□ -1.24
Shmt1P50431 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC7.29□□□□□ -1.24
Shmt1P50431 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Gm28929-201ENSMUST00000185330 1193 ntBASIC7.29□□□□□ -1.24
Shmt1P50431 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC7.29□□□□□ -1.24
Shmt1P50431 Gm7867-201ENSMUST00000189856 546 ntBASIC7.29□□□□□ -1.24
Shmt1P50431 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC7.29□□□□□ -1.24
Shmt1P50431 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Gm43063-201ENSMUST00000198198 1081 ntBASIC7.29□□□□□ -1.24
Shmt1P50431 Gm4860-201ENSMUST00000200368 454 ntBASIC7.29□□□□□ -1.24
Shmt1P50431 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
Shmt1P50431 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC7.29□□□□□ -1.24
Shmt1P50431 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.29□□□□□ -1.24
Shmt1P50431 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.29□□□□□ -1.24
Shmt1P50431 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.29□□□□□ -1.24
Shmt1P50431 AC151730.1-201ENSMUST00000226106 448 ntBASIC7.29□□□□□ -1.24
Shmt1P50431 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Shmt1P50431 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Shmt1P50431 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Shmt1P50431 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Shmt1P50431 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC7.29□□□□□ -1.24
Shmt1P50431 Gm26130-201ENSMUST00000083171 138 ntBASIC7.29□□□□□ -1.24
Shmt1P50431 Mir296-201ENSMUST00000083587 79 ntBASIC7.29□□□□□ -1.24
Shmt1P50431 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Shmt1P50431 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC7.29□□□□□ -1.24
Shmt1P50431 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Gm8177-201ENSMUST00000181591 1336 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Shmt1P50431 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Shmt1P50431 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Shmt1P50431 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Shmt1P50431 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm9144-201ENSMUST00000101625 1008 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Mir674-201ENSMUST00000102421 100 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm6181-201ENSMUST00000117187 264 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Gm13141-201ENSMUST00000117417 456 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm11581-201ENSMUST00000122024 763 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Shmt1P50431 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Gm23276-201ENSMUST00000157913 138 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm17217-201ENSMUST00000166613 469 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm3585-201ENSMUST00000173438 875 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Shmt1P50431 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm8609-201ENSMUST00000182967 998 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Gm27804-201ENSMUST00000185135 119 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm28926-201ENSMUST00000191063 680 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm42474-201ENSMUST00000201073 505 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
Shmt1P50431 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.28□□□□□ -1.24
Shmt1P50431 AC105169.1-201ENSMUST00000218912 1294 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Gm9315-201ENSMUST00000222696 908 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 AC160114.2-201ENSMUST00000223021 300 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Gm7252-201ENSMUST00000223284 456 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Shmt1P50431 AW822073-201ENSMUST00000075305 555 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC7.28□□□□□ -1.24
Shmt1P50431 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Shmt1P50431 Gm37611-201ENSMUST00000195250 2028 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.28□□□□□ -1.24
Shmt1P50431 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms