Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm44652-201ENSMUST00000208648 2854 ntBASIC6.81□□□□□ -1.32
HttP42859 Gm22778-201ENSMUST00000104090 128 ntBASIC6.81□□□□□ -1.32
HttP42859 Gm14294-201ENSMUST00000119749 751 ntBASIC6.81□□□□□ -1.32
HttP42859 Gm23740-201ENSMUST00000157385 100 ntBASIC6.81□□□□□ -1.32
HttP42859 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
HttP42859 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Gm43743-202ENSMUST00000198353 491 ntBASIC6.81□□□□□ -1.32
HttP42859 Gm44705-201ENSMUST00000206719 339 ntBASIC6.81□□□□□ -1.32
HttP42859 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC6.81□□□□□ -1.32
HttP42859 Gm45249-201ENSMUST00000211021 348 ntBASIC6.81□□□□□ -1.32
HttP42859 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
HttP42859 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.81□□□□□ -1.32
HttP42859 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HttP42859 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.81□□□□□ -1.32
HttP42859 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HttP42859 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
HttP42859 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
HttP42859 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Gm25415-201ENSMUST00000104220 132 ntBASIC6.81□□□□□ -1.32
HttP42859 Gm22488-201ENSMUST00000116811 127 ntBASIC6.81□□□□□ -1.32
HttP42859 Gm14300-201ENSMUST00000120800 946 ntBASIC6.81□□□□□ -1.32
HttP42859 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HttP42859 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HttP42859 Gm43846-201ENSMUST00000200502 932 ntBASIC6.81□□□□□ -1.32
HttP42859 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC6.81□□□□□ -1.32
HttP42859 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC6.81□□□□□ -1.32
HttP42859 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.81□□□□□ -1.32
HttP42859 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Arnt2-207ENSMUST00000208232 6047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Zscan29-202ENSMUST00000110661 5072 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
HttP42859 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Sv2b-201ENSMUST00000085164 5307 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 AC158986.1-201ENSMUST00000228391 3455 ntBASIC6.81□□□□□ -1.32
HttP42859 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.81□□□□□ -1.32
HttP42859 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
HttP42859 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
HttP42859 Gm14202-201ENSMUST00000120121 311 ntBASIC6.81□□□□□ -1.32
HttP42859 Gm12229-201ENSMUST00000120487 468 ntBASIC6.81□□□□□ -1.32
HttP42859 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
HttP42859 Gm43712-201ENSMUST00000198020 291 ntBASIC6.81□□□□□ -1.32
HttP42859 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HttP42859 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.81□□□□□ -1.32
HttP42859 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HttP42859 Mir342-201ENSMUST00000083502 99 ntBASIC6.81□□□□□ -1.32
HttP42859 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HttP42859 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HttP42859 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HttP42859 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.8□□□□□ -1.32
HttP42859 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HttP42859 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC6.8□□□□□ -1.32
HttP42859 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC6.8□□□□□ -1.32
HttP42859 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
HttP42859 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
HttP42859 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HttP42859 Gimap4-201ENSMUST00000067506 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HttP42859 Gm43292-201ENSMUST00000199580 2449 ntBASIC6.8□□□□□ -1.32
HttP42859 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
HttP42859 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
HttP42859 Gm24295-201ENSMUST00000158298 131 ntBASIC6.8□□□□□ -1.32
HttP42859 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.8□□□□□ -1.32
HttP42859 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC6.8□□□□□ -1.32
HttP42859 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.8□□□□□ -1.32
HttP42859 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
HttP42859 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HttP42859 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
HttP42859 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HttP42859 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HttP42859 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.8□□□□□ -1.32
HttP42859 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.8□□□□□ -1.32
HttP42859 Gm14175-201ENSMUST00000119835 241 ntBASIC6.8□□□□□ -1.32
HttP42859 Gm26970-201ENSMUST00000182990 964 ntBASIC6.8□□□□□ -1.32
HttP42859 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC6.8□□□□□ -1.32
HttP42859 Gm29197-201ENSMUST00000185922 702 ntBASIC6.8□□□□□ -1.32
HttP42859 Gm28188-201ENSMUST00000190483 236 ntBASIC6.8□□□□□ -1.32
HttP42859 Gm20203-201ENSMUST00000192352 332 ntBASIC6.8□□□□□ -1.32
HttP42859 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HttP42859 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HttP42859 Gm44432-201ENSMUST00000203342 938 ntBASIC6.8□□□□□ -1.32
HttP42859 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.8□□□□□ -1.32
HttP42859 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC6.8□□□□□ -1.32
HttP42859 Gm45724-201ENSMUST00000213031 420 ntBASIC6.8□□□□□ -1.32
HttP42859 Akap6-202ENSMUST00000219786 4564 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HttP42859 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.8□□□□□ -1.32
HttP42859 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HttP42859 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
HttP42859 Gm38056-201ENSMUST00000193928 5027 ntBASIC6.8□□□□□ -1.32
HttP42859 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms