Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC7.84□□□□□ -1.15
Col1a1P11087 Gm22548-201ENSMUST00000174899 78 ntBASIC7.84□□□□□ -1.15
Col1a1P11087 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Col1a1P11087 Mir7008-201ENSMUST00000184398 63 ntBASIC7.84□□□□□ -1.15
Col1a1P11087 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC7.84□□□□□ -1.15
Col1a1P11087 Gm5853-201ENSMUST00000197183 632 ntBASIC7.84□□□□□ -1.15
Col1a1P11087 Gm43945-201ENSMUST00000203595 754 ntBASIC7.84□□□□□ -1.15
Col1a1P11087 Gm45185-201ENSMUST00000207556 404 ntBASIC7.84□□□□□ -1.15
Col1a1P11087 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.84□□□□□ -1.15
Col1a1P11087 Gm9110-201ENSMUST00000219035 617 ntBASIC7.84□□□□□ -1.15
Col1a1P11087 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC7.84□□□□□ -1.15
Col1a1P11087 Gm23456-201ENSMUST00000083335 137 ntBASIC7.84□□□□□ -1.15
Col1a1P11087 Gm7731-201ENSMUST00000091759 470 ntBASIC7.84□□□□□ -1.15
Col1a1P11087 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Col1a1P11087 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 Gm2223-201ENSMUST00000112099 1350 ntBASIC7.84□□□□□ -1.15
Col1a1P11087 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC7.84□□□□□ -1.15
Col1a1P11087 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC7.84□□□□□ -1.15
Col1a1P11087 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Col1a1P11087 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
Col1a1P11087 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.16
Col1a1P11087 CT009757.6-201ENSMUST00000220661 2312 ntBASIC7.84□□□□□ -1.16
Col1a1P11087 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
Col1a1P11087 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.84□□□□□ -1.16
Col1a1P11087 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
Col1a1P11087 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
Col1a1P11087 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col1a1P11087 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.83□□□□□ -1.16
Col1a1P11087 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col1a1P11087 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col1a1P11087 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Col1a1P11087 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Col1a1P11087 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.83□□□□□ -1.16
Col1a1P11087 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.83□□□□□ -1.16
Col1a1P11087 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.83□□□□□ -1.16
Col1a1P11087 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Col1a1P11087 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col1a1P11087 Gm12643-201ENSMUST00000116078 374 ntBASIC7.83□□□□□ -1.16
Col1a1P11087 Gm13455-201ENSMUST00000118767 517 ntBASIC7.83□□□□□ -1.16
Col1a1P11087 Gm23891-201ENSMUST00000158114 138 ntBASIC7.83□□□□□ -1.16
Col1a1P11087 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC7.83□□□□□ -1.16
Col1a1P11087 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col1a1P11087 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col1a1P11087 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC7.83□□□□□ -1.16
Col1a1P11087 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.83□□□□□ -1.16
Col1a1P11087 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.83□□□□□ -1.16
Col1a1P11087 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.83□□□□□ -1.16
Col1a1P11087 AL669819.1-201ENSMUST00000225143 330 ntBASIC7.83□□□□□ -1.16
Col1a1P11087 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC7.83□□□□□ -1.16
Col1a1P11087 AC158986.1-201ENSMUST00000228391 3455 ntBASIC7.83□□□□□ -1.16
Col1a1P11087 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC7.83□□□□□ -1.16
Col1a1P11087 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col1a1P11087 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
Col1a1P11087 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col1a1P11087 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Col1a1P11087 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.83□□□□□ -1.16
Col1a1P11087 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col1a1P11087 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col1a1P11087 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col1a1P11087 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
Col1a1P11087 Gm38009-201ENSMUST00000194884 3341 ntBASIC7.83□□□□□ -1.16
Col1a1P11087 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col1a1P11087 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Col1a1P11087 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col1a1P11087 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col1a1P11087 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col1a1P11087 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC7.82□□□□□ -1.16
Col1a1P11087 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.82□□□□□ -1.16
Col1a1P11087 Gm14529-201ENSMUST00000117894 406 ntBASIC7.82□□□□□ -1.16
Col1a1P11087 Gm15332-201ENSMUST00000118386 357 ntBASIC7.82□□□□□ -1.16
Col1a1P11087 Gm14746-201ENSMUST00000120309 741 ntBASIC7.82□□□□□ -1.16
Col1a1P11087 Gm24719-201ENSMUST00000157520 110 ntBASIC7.82□□□□□ -1.16
Col1a1P11087 Gm22552-201ENSMUST00000157796 337 ntBASIC7.82□□□□□ -1.16
Col1a1P11087 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC7.82□□□□□ -1.16
Col1a1P11087 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC7.82□□□□□ -1.16
Col1a1P11087 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC7.82□□□□□ -1.16
Col1a1P11087 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC7.82□□□□□ -1.16
Col1a1P11087 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC7.82□□□□□ -1.16
Col1a1P11087 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC7.82□□□□□ -1.16
Col1a1P11087 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC7.82□□□□□ -1.16
Col1a1P11087 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC7.82□□□□□ -1.16
Col1a1P11087 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC7.82□□□□□ -1.16
Col1a1P11087 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Col1a1P11087 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC7.82□□□□□ -1.16
Col1a1P11087 Gm44312-201ENSMUST00000203536 469 ntBASIC7.82□□□□□ -1.16
Col1a1P11087 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC7.82□□□□□ -1.16
Col1a1P11087 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC7.82□□□□□ -1.16
Col1a1P11087 AC105950.1-201ENSMUST00000222637 408 ntBASIC7.82□□□□□ -1.16
Col1a1P11087 Gm8256-203ENSMUST00000228692 591 ntBASIC7.82□□□□□ -1.16
Col1a1P11087 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Col1a1P11087 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC7.82□□□□□ -1.16
Col1a1P11087 Snora44-201ENSMUST00000082670 129 ntBASIC7.82□□□□□ -1.16
Col1a1P11087 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Col1a1P11087 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms