Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm11903-201ENSMUST00000118958 727 ntBASIC6.76□□□□□ -1.33
CopeO89079 Gm12727-201ENSMUST00000119885 359 ntBASIC6.76□□□□□ -1.33
CopeO89079 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC6.76□□□□□ -1.33
CopeO89079 Gm22235-201ENSMUST00000157085 110 ntBASIC6.76□□□□□ -1.33
CopeO89079 Gm24647-201ENSMUST00000157112 113 ntBASIC6.76□□□□□ -1.33
CopeO89079 Gm25057-201ENSMUST00000157366 88 ntBASIC6.76□□□□□ -1.33
CopeO89079 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CopeO89079 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CopeO89079 Gm20691-201ENSMUST00000176889 333 ntBASIC6.76□□□□□ -1.33
CopeO89079 Gm27019-201ENSMUST00000183056 404 ntBASIC6.76□□□□□ -1.33
CopeO89079 Gm28894-201ENSMUST00000185214 615 ntBASIC6.76□□□□□ -1.33
CopeO89079 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CopeO89079 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.76□□□□□ -1.33
CopeO89079 Gm37369-201ENSMUST00000194179 615 ntBASIC6.76□□□□□ -1.33
CopeO89079 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.76□□□□□ -1.33
CopeO89079 Gm45394-201ENSMUST00000209240 1175 ntBASIC6.76□□□□□ -1.33
CopeO89079 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.76□□□□□ -1.33
CopeO89079 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.76□□□□□ -1.33
CopeO89079 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.76□□□□□ -1.33
CopeO89079 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.76□□□□□ -1.33
CopeO89079 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.76□□□□□ -1.33
CopeO89079 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CopeO89079 Gm25852-201ENSMUST00000082790 130 ntBASIC6.76□□□□□ -1.33
CopeO89079 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CopeO89079 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
CopeO89079 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.76□□□□□ -1.33
CopeO89079 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CopeO89079 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CopeO89079 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CopeO89079 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.76□□□□□ -1.33
CopeO89079 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CopeO89079 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
CopeO89079 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
CopeO89079 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.76□□□□□ -1.33
CopeO89079 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.76□□□□□ -1.33
CopeO89079 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CopeO89079 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CopeO89079 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.75□□□□□ -1.33
CopeO89079 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
CopeO89079 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.75□□□□□ -1.33
CopeO89079 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.75□□□□□ -1.33
CopeO89079 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CopeO89079 Gm24519-201ENSMUST00000104507 132 ntBASIC6.75□□□□□ -1.33
CopeO89079 Gm11926-201ENSMUST00000118520 430 ntBASIC6.75□□□□□ -1.33
CopeO89079 Gm24176-201ENSMUST00000158928 121 ntBASIC6.75□□□□□ -1.33
CopeO89079 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 Gm29650-201ENSMUST00000188485 742 ntBASIC6.75□□□□□ -1.33
CopeO89079 Gm7412-201ENSMUST00000191692 605 ntBASIC6.75□□□□□ -1.33
CopeO89079 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.75□□□□□ -1.33
CopeO89079 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.75□□□□□ -1.33
CopeO89079 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.75□□□□□ -1.33
CopeO89079 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.75□□□□□ -1.33
CopeO89079 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC6.75□□□□□ -1.33
CopeO89079 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.75□□□□□ -1.33
CopeO89079 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CopeO89079 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.75□□□□□ -1.33
CopeO89079 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CopeO89079 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.75□□□□□ -1.33
CopeO89079 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CopeO89079 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CopeO89079 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.75□□□□□ -1.33
CopeO89079 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.75□□□□□ -1.33
CopeO89079 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CopeO89079 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
CopeO89079 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CopeO89079 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
CopeO89079 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CopeO89079 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CopeO89079 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
CopeO89079 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CopeO89079 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CopeO89079 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CopeO89079 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CopeO89079 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CopeO89079 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CopeO89079 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CopeO89079 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
CopeO89079 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CopeO89079 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CopeO89079 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CopeO89079 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CopeO89079 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.74□□□□□ -1.33
CopeO89079 Gm26419-201ENSMUST00000104272 133 ntBASIC6.74□□□□□ -1.33
CopeO89079 Gm15105-201ENSMUST00000117777 204 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms