Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Mir1897-202ENSMUST00000198006 79 ntBASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Gm45735-201ENSMUST00000212779 319 ntBASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 AC158606.1-201ENSMUST00000220078 325 ntBASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 AC124732.4-201ENSMUST00000220930 1274 ntBASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 AC132315.1-201ENSMUST00000221771 390 ntBASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Glycam1-204ENSMUST00000228895 641 ntBASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Gm7204-201ENSMUST00000062591 600 ntBASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Gm26072-201ENSMUST00000083135 107 ntBASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Rpl36-ps3-201ENSMUST00000085720 315 ntBASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Hps1-202ENSMUST00000069298 3196 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Nim1k-201ENSMUST00000178142 4103 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 AC168056.3-201ENSMUST00000225395 2540 ntBASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Gm45193-201ENSMUST00000204686 1552 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Gm15084-201ENSMUST00000178585 1502 ntBASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Xpnpep2-202ENSMUST00000114998 3017 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Slc25a35-201ENSMUST00000018884 3648 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Crxos-204ENSMUST00000150050 2090 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Timeless-203ENSMUST00000105242 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Gm37663-201ENSMUST00000191887 2299 ntBASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Mtbp-201ENSMUST00000022998 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx1-1G3UXB3 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm11346-203ENSMUST00000135889 2832 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm42841-201ENSMUST00000199806 1932 ntBASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gpr75-201ENSMUST00000109430 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Ankfn1-202ENSMUST00000128717 2391 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 AC168276.1-201ENSMUST00000218963 2385 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Cul4b-201ENSMUST00000016681 3354 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Cd59b-203ENSMUST00000111131 555 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm14162-201ENSMUST00000121985 601 ntBASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm15843-201ENSMUST00000146593 529 ntBASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm22871-201ENSMUST00000177097 54 ntBASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm5181-201ENSMUST00000183140 971 ntBASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Mir6357-201ENSMUST00000184246 104 ntBASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm29238-201ENSMUST00000189709 695 ntBASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm8115-201ENSMUST00000197137 736 ntBASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm7652-201ENSMUST00000200440 1151 ntBASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm44543-201ENSMUST00000209136 396 ntBASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm5649-201ENSMUST00000217918 951 ntBASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm9318-201ENSMUST00000222444 438 ntBASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm14267-208ENSMUST00000228324 1189 ntBASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 AC131029.2-202ENSMUST00000228430 496 ntBASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm26447-201ENSMUST00000082448 129 ntBASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm37567-201ENSMUST00000193241 2279 ntBASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 A730018C14Rik-201ENSMUST00000050754 2253 ntTSL 2 BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Rab11fip3-201ENSMUST00000118828 3271 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Itga10-202ENSMUST00000119365 5035 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Nkx1-1G3UXB3 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms