Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
NpcdF8VQB8 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
NpcdF8VQB8 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC8.71□□□□□ -1.01
NpcdF8VQB8 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
NpcdF8VQB8 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm22267-201ENSMUST00000104008 131 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm13772-201ENSMUST00000118431 317 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm11585-201ENSMUST00000120901 569 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm2735-201ENSMUST00000136133 277 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm25395-201ENSMUST00000157343 272 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm9359-201ENSMUST00000163721 1221 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm20454-201ENSMUST00000172713 221 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm28437-201ENSMUST00000190277 783 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC8.71□□□□□ -1.02
NpcdF8VQB8 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm42723-201ENSMUST00000199966 1044 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm18598-201ENSMUST00000207724 597 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm45279-201ENSMUST00000210315 391 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 AC113305.1-201ENSMUST00000214664 724 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm4808-201ENSMUST00000222283 1203 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 AC132954.2-201ENSMUST00000222400 403 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Klf10-202ENSMUST00000226363 2917 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm10307-201ENSMUST00000189839 1337 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm42942-201ENSMUST00000196086 1328 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
NpcdF8VQB8 AC153152.1-201ENSMUST00000221105 2742 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Gm9585-201ENSMUST00000219681 1404 ntBASIC8.71□□□□□ -1.02
NpcdF8VQB8 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
NpcdF8VQB8 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm44165-201ENSMUST00000203093 1469 ntBASIC8.7□□□□□ -1.02
NpcdF8VQB8 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm38331-201ENSMUST00000195719 2671 ntBASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm38099-201ENSMUST00000193280 3170 ntBASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm37078-201ENSMUST00000193314 2009 ntBASIC8.7□□□□□ -1.02
NpcdF8VQB8 CR974429.2-201ENSMUST00000221883 1696 ntBASIC8.7□□□□□ -1.02
NpcdF8VQB8 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm4910-201ENSMUST00000119605 366 ntBASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
NpcdF8VQB8 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm23467-201ENSMUST00000157127 159 ntBASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm22795-201ENSMUST00000157233 118 ntBASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm26738-201ENSMUST00000181312 601 ntBASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm18699-201ENSMUST00000190713 243 ntBASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm18747-201ENSMUST00000198129 648 ntBASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC8.7□□□□□ -1.02
NpcdF8VQB8 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
NpcdF8VQB8 AC127242.3-201ENSMUST00000222009 580 ntBASIC8.7□□□□□ -1.02
NpcdF8VQB8 AC165157.1-201ENSMUST00000222981 580 ntBASIC8.7□□□□□ -1.02
NpcdF8VQB8 AC154380.1-201ENSMUST00000226804 720 ntBASIC8.7□□□□□ -1.02
NpcdF8VQB8 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
NpcdF8VQB8 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
NpcdF8VQB8 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms