Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm11545-201ENSMUST00000146507 375 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm28429-201ENSMUST00000188521 363 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm42522-201ENSMUST00000196071 255 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm43164-201ENSMUST00000202529 2128 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Olfr1350-203ENSMUST00000219278 1768 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm22273-201ENSMUST00000104040 132 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm24173-201ENSMUST00000104130 128 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm23171-201ENSMUST00000157159 264 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm44561-201ENSMUST00000208869 264 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Tbc1d24-204ENSMUST00000167791 4383 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Igkv11-106-201ENSMUST00000103331 346 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm20691-201ENSMUST00000176889 333 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm18444-201ENSMUST00000191239 629 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm38226-201ENSMUST00000192207 521 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm43441-201ENSMUST00000201458 205 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.42□□□□□ -1.38
Col6a3E9PWQ3 Gm37956-201ENSMUST00000195208 2010 ntBASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Dgkh-204ENSMUST00000227767 3319 ntBASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Gm43292-201ENSMUST00000199580 2449 ntBASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Gm15903-202ENSMUST00000199631 3518 ntBASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Gm18247-201ENSMUST00000222937 601 ntBASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Gm37097-201ENSMUST00000193676 336 ntBASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Ttll7-201ENSMUST00000037942 7394 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a3E9PWQ3 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Gm24117-201ENSMUST00000103973 133 ntBASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Gm12988-201ENSMUST00000119054 478 ntBASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Gm13626-201ENSMUST00000119435 402 ntBASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.4□□□□□ -1.38
Col6a3E9PWQ3 Supt4b-201ENSMUST00000214434 351 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms