Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Ddx56Q9D0R4 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Ddx56Q9D0R4 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC7.4□□□□□ -1.23
Ddx56Q9D0R4 Gm44101-201ENSMUST00000203951 2221 ntBASIC7.4□□□□□ -1.23
Ddx56Q9D0R4 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Ddx56Q9D0R4 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Ddx56Q9D0R4 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Ddx56Q9D0R4 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC7.4□□□□□ -1.23
Ddx56Q9D0R4 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Ddx56Q9D0R4 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Ddx56Q9D0R4 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.23
Ddx56Q9D0R4 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm13106-201ENSMUST00000119045 1443 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm22707-201ENSMUST00000103834 110 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm25757-201ENSMUST00000103986 123 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm24284-201ENSMUST00000104240 142 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm14584-201ENSMUST00000118956 637 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm7420-201ENSMUST00000162836 842 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm4373-201ENSMUST00000178571 556 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm4956-202ENSMUST00000178869 672 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm26528-201ENSMUST00000181965 283 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm5300-201ENSMUST00000182201 1003 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm27006-201ENSMUST00000182218 943 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm10925-201ENSMUST00000189941 678 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm2979-201ENSMUST00000193442 463 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm26413-201ENSMUST00000196783 126 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm10416-201ENSMUST00000197379 645 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm3511-201ENSMUST00000199823 204 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm45247-201ENSMUST00000210757 309 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm4247-201ENSMUST00000211441 1042 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm18860-201ENSMUST00000212029 764 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 n-R5s29-201ENSMUST00000082836 119 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm44186-201ENSMUST00000204118 2752 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 CT030159.1-201ENSMUST00000221580 2261 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx56Q9D0R4 Gm19801-201ENSMUST00000218231 1882 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 AC091783.1-201ENSMUST00000223614 1613 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Gm37911-201ENSMUST00000193099 1545 ntBASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx56Q9D0R4 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms