Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Pfdn1Q9CWM4 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm38147-201ENSMUST00000192397 1798 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm22022-201ENSMUST00000104355 127 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm25232-201ENSMUST00000104502 132 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Zfp389-201ENSMUST00000118425 675 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm13005-201ENSMUST00000119518 585 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm14332-201ENSMUST00000121982 899 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm22484-201ENSMUST00000157992 306 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm15251-201ENSMUST00000177947 883 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Kif4-ps-202ENSMUST00000185083 652 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm38203-201ENSMUST00000191815 245 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm32496-201ENSMUST00000191988 702 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm44159-201ENSMUST00000204065 442 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm21321-201ENSMUST00000220179 446 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 AC122354.1-201ENSMUST00000222328 702 ntTSL 5 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 AC131187.2-201ENSMUST00000223936 994 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 AC129537.1-202ENSMUST00000226619 430 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Mir135b-201ENSMUST00000083501 97 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Pfdn1Q9CWM4 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Mir671-201ENSMUST00000102432 98 ntBASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm22934-201ENSMUST00000103961 132 ntBASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm8818-201ENSMUST00000110797 1047 ntBASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm13679-201ENSMUST00000118678 484 ntBASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm11969-201ENSMUST00000118848 356 ntBASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm13915-201ENSMUST00000119314 931 ntBASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm3585-201ENSMUST00000173438 875 ntBASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm8305-201ENSMUST00000180022 1195 ntBASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm20587-201ENSMUST00000186367 1186 ntBASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm29385-201ENSMUST00000186831 363 ntBASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Spata45-202ENSMUST00000192151 443 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm6394-201ENSMUST00000197077 477 ntBASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm40319-201ENSMUST00000199785 481 ntBASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 Gm45283-201ENSMUST00000210593 628 ntBASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 CT009742.1-201ENSMUST00000222507 702 ntBASIC5.66□□□□□ -1.5
Pfdn1Q9CWM4 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms