Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Use1Q9CQ56 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm22661-201ENSMUST00000104192 132 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm14729-201ENSMUST00000118373 689 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm11498-201ENSMUST00000120660 949 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm12903-201ENSMUST00000121015 544 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm24130-201ENSMUST00000158536 151 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm17022-201ENSMUST00000166415 922 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm21392-201ENSMUST00000182950 972 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm18428-201ENSMUST00000194986 791 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm2860-201ENSMUST00000199226 707 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm43040-201ENSMUST00000202399 558 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm5305-201ENSMUST00000204010 746 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm45100-201ENSMUST00000209153 391 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC6.31□□□□□ -1.4
Use1Q9CQ56 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm15500-201ENSMUST00000071523 894 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm25587-201ENSMUST00000082498 166 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Use1Q9CQ56 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Use1Q9CQ56 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Gm45360-201ENSMUST00000210698 1405 ntBASIC6.31□□□□□ -1.4
Use1Q9CQ56 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Use1Q9CQ56 Thap6-201ENSMUST00000191860 3151 ntBASIC6.3□□□□□ -1.4
Use1Q9CQ56 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.3□□□□□ -1.4
Use1Q9CQ56 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Use1Q9CQ56 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm25379-201ENSMUST00000104338 114 ntBASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm23834-201ENSMUST00000104436 129 ntBASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm11318-201ENSMUST00000118640 961 ntBASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Mir1930-201ENSMUST00000158799 84 ntBASIC6.3□□□□□ -1.4
Use1Q9CQ56 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Use1Q9CQ56 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm45122-201ENSMUST00000206376 784 ntBASIC6.3□□□□□ -1.4
Use1Q9CQ56 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm8804-201ENSMUST00000212292 798 ntBASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm18914-201ENSMUST00000214625 616 ntBASIC6.3□□□□□ -1.4
Use1Q9CQ56 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.3□□□□□ -1.4
Use1Q9CQ56 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm18503-201ENSMUST00000220340 728 ntBASIC6.3□□□□□ -1.4
Use1Q9CQ56 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 AC131029.2-203ENSMUST00000228116 1244 ntBASIC6.3□□□□□ -1.4
Use1Q9CQ56 AC107453.3-201ENSMUST00000228205 639 ntBASIC6.3□□□□□ -1.4
Use1Q9CQ56 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Use1Q9CQ56 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms