Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Ccdc9Q8VC31 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Ccdc9Q8VC31 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Ccdc9Q8VC31 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Ccdc9Q8VC31 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc9Q8VC31 Gm38137-201ENSMUST00000193735 1401 ntBASIC8.09□□□□□ -1.11
Ccdc9Q8VC31 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc9Q8VC31 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc9Q8VC31 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc9Q8VC31 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Ccdc9Q8VC31 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Ccdc9Q8VC31 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC8.09□□□□□ -1.11
Ccdc9Q8VC31 Gm37943-201ENSMUST00000194053 3944 ntBASIC8.09□□□□□ -1.12
Ccdc9Q8VC31 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC8.09□□□□□ -1.12
Ccdc9Q8VC31 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
Ccdc9Q8VC31 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm44220-201ENSMUST00000203784 2487 ntBASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 AL591843.1-201ENSMUST00000223686 3082 ntBASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm12297-201ENSMUST00000121380 979 ntBASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm3242-201ENSMUST00000171273 485 ntBASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm3605-201ENSMUST00000185858 440 ntBASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm28973-201ENSMUST00000189310 613 ntBASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm38164-201ENSMUST00000192810 330 ntBASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm42472-201ENSMUST00000201626 859 ntBASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm5110-201ENSMUST00000203122 1063 ntBASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm4898-201ENSMUST00000218519 832 ntBASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Olfr888-201ENSMUST00000075228 945 ntBASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm37342-201ENSMUST00000194588 4965 ntBASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc9Q8VC31 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Gm6292-201ENSMUST00000120712 1095 ntBASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Mir1968-201ENSMUST00000157429 68 ntBASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Gm28149-201ENSMUST00000187102 378 ntBASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Gm28768-201ENSMUST00000189034 378 ntBASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Gm43815-201ENSMUST00000197676 990 ntBASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Gm7478-201ENSMUST00000201054 581 ntBASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Gm19254-201ENSMUST00000204828 294 ntBASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Gm18292-201ENSMUST00000216673 919 ntBASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 AC154283.1-201ENSMUST00000228417 389 ntBASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Gm7647-201ENSMUST00000200996 1389 ntBASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc9Q8VC31 Gm42676-201ENSMUST00000197609 2686 ntBASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Ccdc9Q8VC31 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 190.1 ms