Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm25757-201ENSMUST00000103986 123 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm23748-201ENSMUST00000104227 131 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm22710-201ENSMUST00000116892 125 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm7821-201ENSMUST00000117111 788 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm12635-201ENSMUST00000117285 752 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm13469-201ENSMUST00000118231 350 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm11976-201ENSMUST00000119236 295 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm12903-201ENSMUST00000121015 544 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm6067-201ENSMUST00000121648 491 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm11545-201ENSMUST00000146507 375 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm7244-201ENSMUST00000164658 455 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm9274-201ENSMUST00000182505 984 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm8454-201ENSMUST00000196980 811 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm42573-201ENSMUST00000202327 478 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm31579-201ENSMUST00000203306 966 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm4270-201ENSMUST00000209666 406 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm6667-201ENSMUST00000217169 564 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 AC107452.3-201ENSMUST00000228807 1308 ntBASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm15054-201ENSMUST00000117393 281 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm14900-201ENSMUST00000120304 733 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm12229-201ENSMUST00000120487 468 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm22235-201ENSMUST00000157085 110 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm24647-201ENSMUST00000157112 113 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm25057-201ENSMUST00000157366 88 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm20691-201ENSMUST00000176889 333 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm27019-201ENSMUST00000183056 404 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm28894-201ENSMUST00000185214 615 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm29650-201ENSMUST00000188485 742 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm7412-201ENSMUST00000191692 605 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm35323-201ENSMUST00000191836 499 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm37369-201ENSMUST00000194179 615 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm4953-201ENSMUST00000077309 483 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm25852-201ENSMUST00000082790 130 ntBASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28aQ8CEI3 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc28aQ8CEI3 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms