Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm14480-201ENSMUST00000118521 433 ntBASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm24286-201ENSMUST00000157632 128 ntBASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm22206-201ENSMUST00000158612 116 ntBASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm9167-201ENSMUST00000182469 962 ntBASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Mir6919-201ENSMUST00000185146 62 ntBASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28958-201ENSMUST00000185864 703 ntBASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm29160-201ENSMUST00000190094 699 ntBASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Zfp874a-208ENSMUST00000225479 1092 ntBASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28bQ8CEG5 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm7091-201ENSMUST00000116438 586 ntBASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm12813-201ENSMUST00000119615 902 ntBASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm11371-201ENSMUST00000120294 385 ntBASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm15049-201ENSMUST00000120474 463 ntBASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm38164-201ENSMUST00000192810 330 ntBASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm37493-201ENSMUST00000193167 433 ntBASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm26413-202ENSMUST00000198972 127 ntBASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Thoc7-209ENSMUST00000225325 765 ntBASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc28bQ8CEG5 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms