Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm14733-201ENSMUST00000117680 133 ntBASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm12630-201ENSMUST00000121575 784 ntBASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm12175-201ENSMUST00000122081 345 ntBASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm29156-201ENSMUST00000187764 499 ntBASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm7663-201ENSMUST00000201151 1240 ntBASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm43459-201ENSMUST00000202093 331 ntBASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm44856-201ENSMUST00000206639 304 ntBASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm5324-201ENSMUST00000208115 476 ntBASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm2767-201ENSMUST00000209582 473 ntBASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm5928-201ENSMUST00000221839 466 ntBASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 AC170086.2-201ENSMUST00000224733 803 ntBASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 AC132260.1-201ENSMUST00000225499 734 ntBASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 AC123656.1-201ENSMUST00000227121 581 ntBASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm21731-201ENSMUST00000079524 489 ntBASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Gm38124-201ENSMUST00000191710 2581 ntBASIC8.05□□□□□ -1.12
Atg4aQ8C9S8 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Gm44046-201ENSMUST00000203145 2678 ntBASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Gm12842-201ENSMUST00000117298 476 ntBASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Gm11796-201ENSMUST00000120208 972 ntBASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Gm5578-201ENSMUST00000121490 1236 ntBASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Gm23762-201ENSMUST00000158348 106 ntBASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Gm28023-201ENSMUST00000184556 60 ntBASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Gm27825-201ENSMUST00000184586 60 ntBASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Gm27299-201ENSMUST00000184593 103 ntBASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Mir8097-201ENSMUST00000185150 119 ntBASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Gm17895-201ENSMUST00000194028 874 ntBASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Gm29784-201ENSMUST00000196217 406 ntBASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Gm43396-201ENSMUST00000197506 706 ntBASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Gm43063-201ENSMUST00000198198 1081 ntBASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 AL837512.1-201ENSMUST00000223914 1073 ntBASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 AC158750.1-201ENSMUST00000226163 634 ntBASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 AC155234.1-201ENSMUST00000225610 2823 ntBASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
Atg4aQ8C9S8 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm44763-201ENSMUST00000208287 2019 ntBASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC8.03□□□□□ -1.12
Atg4aQ8C9S8 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms