Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Gm18849-201ENSMUST00000189861 560 ntBASIC9.43□□□□□ -0.9
Usp47Q8BY87 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Gm42799-201ENSMUST00000201331 328 ntBASIC9.43□□□□□ -0.9
Usp47Q8BY87 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC9.43□□□□□ -0.9
Usp47Q8BY87 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Gm18620-201ENSMUST00000222295 324 ntBASIC9.43□□□□□ -0.9
Usp47Q8BY87 AC170086.2-201ENSMUST00000224733 803 ntBASIC9.43□□□□□ -0.9
Usp47Q8BY87 AC166574.3-201ENSMUST00000226725 367 ntBASIC9.43□□□□□ -0.9
Usp47Q8BY87 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC9.43□□□□□ -0.9
Usp47Q8BY87 n-R5s56-201ENSMUST00000082521 105 ntBASIC9.43□□□□□ -0.9
Usp47Q8BY87 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Gm18879-201ENSMUST00000221187 1537 ntBASIC9.43□□□□□ -0.9
Usp47Q8BY87 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Mir680-1-201ENSMUST00000102257 109 ntBASIC9.42□□□□□ -0.9
Usp47Q8BY87 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Gm11245-201ENSMUST00000119419 1037 ntBASIC9.42□□□□□ -0.9
Usp47Q8BY87 Gm26023-201ENSMUST00000122722 313 ntBASIC9.42□□□□□ -0.9
Usp47Q8BY87 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC9.42□□□□□ -0.9
Usp47Q8BY87 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC9.42□□□□□ -0.9
Usp47Q8BY87 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Gm23259-201ENSMUST00000158318 303 ntBASIC9.42□□□□□ -0.9
Usp47Q8BY87 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Gm412-201ENSMUST00000193360 948 ntBASIC9.42□□□□□ -0.9
Usp47Q8BY87 Gm17997-201ENSMUST00000211801 840 ntBASIC9.42□□□□□ -0.9
Usp47Q8BY87 Gm19340-201ENSMUST00000221995 345 ntBASIC9.42□□□□□ -0.9
Usp47Q8BY87 CT025579.4-201ENSMUST00000224598 627 ntBASIC9.42□□□□□ -0.9
Usp47Q8BY87 AC105324.1-201ENSMUST00000227844 386 ntBASIC9.42□□□□□ -0.9
Usp47Q8BY87 Gm24032-201ENSMUST00000083932 159 ntBASIC9.42□□□□□ -0.9
Usp47Q8BY87 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Gm37255-201ENSMUST00000193302 3060 ntBASIC9.42□□□□□ -0.9
Usp47Q8BY87 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp47Q8BY87 Phxr4-202ENSMUST00000216590 1391 ntBASIC9.42□□□□□ -0.9
Usp47Q8BY87 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp47Q8BY87 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC9.41□□□□□ -0.9
Usp47Q8BY87 AC138765.2-202ENSMUST00000228418 3435 ntBASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm20121-201ENSMUST00000198547 1594 ntBASIC9.41□□□□□ -0.9
Usp47Q8BY87 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm43581-201ENSMUST00000196766 2864 ntBASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm14513-201ENSMUST00000117403 123 ntBASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm2986-201ENSMUST00000121603 382 ntBASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm8648-201ENSMUST00000122457 221 ntBASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm23071-201ENSMUST00000158242 115 ntBASIC9.41□□□□□ -0.9
Usp47Q8BY87 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm37189-201ENSMUST00000192131 298 ntBASIC9.41□□□□□ -0.9
Usp47Q8BY87 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm7554-201ENSMUST00000202282 574 ntBASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm44538-201ENSMUST00000205615 348 ntBASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm18600-201ENSMUST00000207205 505 ntBASIC9.41□□□□□ -0.9
Usp47Q8BY87 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm21731-201ENSMUST00000079524 489 ntBASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm15732-201ENSMUST00000079794 480 ntBASIC9.41□□□□□ -0.9
Usp47Q8BY87 Olfr687-201ENSMUST00000098154 938 ntBASIC9.41□□□□□ -0.9
Usp47Q8BY87 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm6493-201ENSMUST00000159889 1786 ntBASIC9.41□□□□□ -0.9
Usp47Q8BY87 Gm44677-201ENSMUST00000209151 3739 ntBASIC9.41□□□□□ -0.9
Usp47Q8BY87 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Usp47Q8BY87 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms