Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm27970-201ENSMUST00000184854 407 ntBASIC7.82□□□□□ -1.16
Nup98Q6PFD9 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC7.82□□□□□ -1.16
Nup98Q6PFD9 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Nup98Q6PFD9 Gm37604-201ENSMUST00000191749 1272 ntBASIC7.82□□□□□ -1.16
Nup98Q6PFD9 Gm412-201ENSMUST00000193360 948 ntBASIC7.82□□□□□ -1.16
Nup98Q6PFD9 Gm18805-201ENSMUST00000206872 655 ntBASIC7.82□□□□□ -1.16
Nup98Q6PFD9 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Nup98Q6PFD9 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC7.82□□□□□ -1.16
Nup98Q6PFD9 AC156559.2-201ENSMUST00000224403 384 ntBASIC7.82□□□□□ -1.16
Nup98Q6PFD9 AC141476.1-201ENSMUST00000224988 3387 ntBASIC7.82□□□□□ -1.16
Nup98Q6PFD9 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC7.82□□□□□ -1.16
Nup98Q6PFD9 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Nup98Q6PFD9 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Nup98Q6PFD9 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Nup98Q6PFD9 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Nup98Q6PFD9 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Gm12643-201ENSMUST00000116078 374 ntBASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Gm13207-201ENSMUST00000119862 773 ntBASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 AC137871.3-201ENSMUST00000226628 225 ntBASIC7.81□□□□□ -1.16
Nup98Q6PFD9 CT009556.1-201ENSMUST00000227282 449 ntBASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Gm9788-201ENSMUST00000057038 906 ntBASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.81□□□□□ -1.16
Nup98Q6PFD9 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC7.81□□□□□ -1.16
Nup98Q6PFD9 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Gm12400-201ENSMUST00000120915 1003 ntBASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Gm23430-201ENSMUST00000122490 314 ntBASIC7.8□□□□□ -1.16
Nup98Q6PFD9 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Gm6693-201ENSMUST00000189583 813 ntBASIC7.8□□□□□ -1.16
Nup98Q6PFD9 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Gm7663-201ENSMUST00000201151 1240 ntBASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Gm43850-201ENSMUST00000202021 578 ntBASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Prkaa1-202ENSMUST00000228218 4618 ntBASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Gm15016-201ENSMUST00000117300 720 ntBASIC7.8□□□□□ -1.16
Nup98Q6PFD9 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Gm25244-201ENSMUST00000178089 132 ntBASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Gm7166-201ENSMUST00000199715 303 ntBASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Gm5831-201ENSMUST00000216016 1209 ntBASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Gm18103-201ENSMUST00000216621 779 ntBASIC7.8□□□□□ -1.16
Nup98Q6PFD9 AC155941.3-201ENSMUST00000218476 308 ntBASIC7.8□□□□□ -1.16
Nup98Q6PFD9 AC158521.1-202ENSMUST00000224352 645 ntBASIC7.8□□□□□ -1.16
Nup98Q6PFD9 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup98Q6PFD9 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms