Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Mir1960-201ENSMUST00000157488 78 ntBASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Gm26162-201ENSMUST00000157793 132 ntBASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Gm4617-201ENSMUST00000178993 331 ntBASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Gm28620-201ENSMUST00000190463 439 ntBASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Gm37920-201ENSMUST00000192952 749 ntBASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Gm44712-201ENSMUST00000206250 1076 ntBASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 AC137950.3-201ENSMUST00000228250 246 ntBASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Gm9800-201ENSMUST00000052615 336 ntBASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Gm24695-201ENSMUST00000083877 83 ntBASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Gm19024-201ENSMUST00000194681 1319 ntBASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Amy2b-201ENSMUST00000120184 1577 ntBASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Gm44104-201ENSMUST00000204736 3777 ntBASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC8.94□□□□□ -0.98
Sf3b2Q3UJB0 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Gm43410-201ENSMUST00000197510 2234 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 AC117608.1-201ENSMUST00000225500 3418 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Mir466j-201ENSMUST00000116876 122 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Gm13983-201ENSMUST00000118018 865 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Gm13333-201ENSMUST00000119424 781 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Gm3810-201ENSMUST00000122413 476 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Gm22523-201ENSMUST00000158696 100 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Gm9167-201ENSMUST00000182469 962 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Gm9658-201ENSMUST00000182757 1012 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Mir7028-201ENSMUST00000185016 64 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Gm7463-201ENSMUST00000201541 547 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Gm17849-201ENSMUST00000219788 853 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 AC155941.1-201ENSMUST00000220223 529 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 AC121997.2-202ENSMUST00000227158 939 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Olfr467-201ENSMUST00000084756 927 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Gm18796-201ENSMUST00000190440 1767 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Dennd6a-203ENSMUST00000224111 2692 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Gm37647-201ENSMUST00000194556 3143 ntBASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Sf3b2Q3UJB0 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Gm21846-201ENSMUST00000179257 3073 ntBASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Gm24789-201ENSMUST00000104282 131 ntBASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Gm24888-201ENSMUST00000104387 130 ntBASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Gm12901-201ENSMUST00000118690 532 ntBASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Gm8582-201ENSMUST00000164061 789 ntBASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Mir3078-201ENSMUST00000175231 87 ntBASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Mir6903-201ENSMUST00000183597 88 ntBASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC8.92□□□□□ -0.98
Sf3b2Q3UJB0 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms