Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.68□□□□□ -1.34
Trafd1Q3UDK1 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trafd1Q3UDK1 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
Trafd1Q3UDK1 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
Trafd1Q3UDK1 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.68□□□□□ -1.34
Trafd1Q3UDK1 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trafd1Q3UDK1 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trafd1Q3UDK1 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trafd1Q3UDK1 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trafd1Q3UDK1 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.68□□□□□ -1.34
Trafd1Q3UDK1 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trafd1Q3UDK1 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trafd1Q3UDK1 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trafd1Q3UDK1 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trafd1Q3UDK1 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm22781-201ENSMUST00000104083 137 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm13423-201ENSMUST00000117205 888 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm11987-201ENSMUST00000118524 381 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm12242-201ENSMUST00000118824 738 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm11434-201ENSMUST00000122379 629 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm24682-201ENSMUST00000158764 137 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm17022-201ENSMUST00000166415 922 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm27970-201ENSMUST00000184854 407 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Glycam1-204ENSMUST00000228895 641 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 AW822073-201ENSMUST00000075305 555 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm24451-201ENSMUST00000083353 133 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Thap6-201ENSMUST00000191860 3151 ntBASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trafd1Q3UDK1 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm14865-201ENSMUST00000117523 494 ntBASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm13265-201ENSMUST00000118090 421 ntBASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm14729-201ENSMUST00000118373 689 ntBASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm14870-201ENSMUST00000118414 156 ntBASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm12903-201ENSMUST00000121015 544 ntBASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm3760-201ENSMUST00000167475 804 ntBASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Trafd1Q3UDK1 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms