Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
PrkdcP97313 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Epn2-212ENSMUST00000178202 4317 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
PrkdcP97313 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC4.43□□□□□ -1.7
PrkdcP97313 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PrkdcP97313 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Gm27985-201ENSMUST00000185112 378 ntBASIC4.43□□□□□ -1.7
PrkdcP97313 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PrkdcP97313 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PrkdcP97313 Gm42503-201ENSMUST00000199080 3706 ntBASIC4.43□□□□□ -1.7
PrkdcP97313 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC4.42□□□□□ -1.7
PrkdcP97313 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Gm43557-201ENSMUST00000197100 2370 ntBASIC4.42□□□□□ -1.7
PrkdcP97313 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PrkdcP97313 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.42□□□□□ -1.7
PrkdcP97313 Gm23757-201ENSMUST00000158353 100 ntBASIC4.42□□□□□ -1.7
PrkdcP97313 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PrkdcP97313 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC4.42□□□□□ -1.7
PrkdcP97313 Gm5372-201ENSMUST00000187540 409 ntBASIC4.42□□□□□ -1.7
PrkdcP97313 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC4.42□□□□□ -1.7
PrkdcP97313 Gm4032-201ENSMUST00000210886 487 ntBASIC4.42□□□□□ -1.7
PrkdcP97313 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Gm10064-201ENSMUST00000071235 399 ntBASIC4.42□□□□□ -1.7
PrkdcP97313 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PrkdcP97313 Pard3b-203ENSMUST00000094906 7676 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PrkdcP97313 Gm43113-201ENSMUST00000199713 1754 ntBASIC4.42□□□□□ -1.7
PrkdcP97313 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC4.42□□□□□ -1.7
PrkdcP97313 Gm28112-201ENSMUST00000190898 1875 ntBASIC4.42□□□□□ -1.7
PrkdcP97313 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Dgkh-206ENSMUST00000228362 3308 ntBASIC4.42□□□□□ -1.7
PrkdcP97313 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC4.42□□□□□ -1.7
PrkdcP97313 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC4.42□□□□□ -1.7
PrkdcP97313 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Gm22488-201ENSMUST00000116811 127 ntBASIC4.42□□□□□ -1.7
PrkdcP97313 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC4.42□□□□□ -1.7
PrkdcP97313 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Mir1963-201ENSMUST00000158594 59 ntBASIC4.42□□□□□ -1.7
PrkdcP97313 Olfr331-202ENSMUST00000170501 957 ntBASIC4.42□□□□□ -1.7
PrkdcP97313 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC4.42□□□□□ -1.7
PrkdcP97313 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PrkdcP97313 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Scn8a-213ENSMUST00000201549 7120 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
PrkdcP97313 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
PrkdcP97313 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC4.42□□□□□ -1.7
PrkdcP97313 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
PrkdcP97313 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PrkdcP97313 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
PrkdcP97313 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.42□□□□□ -1.7
PrkdcP97313 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC4.42□□□□□ -1.7
PrkdcP97313 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 AC165260.1-201ENSMUST00000224127 683 ntBASIC4.42□□□□□ -1.7
PrkdcP97313 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PrkdcP97313 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PrkdcP97313 Gm42898-201ENSMUST00000200370 3073 ntBASIC4.42□□□□□ -1.7
PrkdcP97313 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC4.42□□□□□ -1.7
PrkdcP97313 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC4.42□□□□□ -1.7
PrkdcP97313 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PrkdcP97313 Gm38386-201ENSMUST00000194293 3421 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PrkdcP97313 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Gm13265-201ENSMUST00000118090 421 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Gm13077-201ENSMUST00000121941 484 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Gm8141-201ENSMUST00000190856 1723 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Gm36935-201ENSMUST00000192526 292 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Gm42452-201ENSMUST00000199749 617 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Gm44940-201ENSMUST00000206225 1247 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PrkdcP97313 CT030170.4-202ENSMUST00000221109 540 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Gm6474-201ENSMUST00000223250 699 ntBASIC4.41□□□□□ -1.7
PrkdcP97313 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PrkdcP97313 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms