Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm28070-201ENSMUST00000191502 445 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Gm43884-201ENSMUST00000204251 559 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.67□□□□□ -1.18
Sox1P53783 Gm2225-201ENSMUST00000209570 377 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC7.67□□□□□ -1.18
Sox1P53783 AC153968.1-201ENSMUST00000215584 334 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Gm46424-201ENSMUST00000221567 168 ntBASIC7.67□□□□□ -1.18
Sox1P53783 AC163631.1-201ENSMUST00000225041 598 ntBASIC7.67□□□□□ -1.18
Sox1P53783 AC110176.1-201ENSMUST00000226219 504 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Sox1P53783 Gm25810-201ENSMUST00000082752 108 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Gm10623-201ENSMUST00000209081 2639 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Sox1P53783 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Sox1P53783 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Ptbp3-210ENSMUST00000173699 2721 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Sox1P53783 A830036E02Rik-204ENSMUST00000139095 3413 ntTSL 2 BASIC7.67□□□□□ -1.18
Sox1P53783 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Gm26967-201ENSMUST00000182878 2303 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Gm38173-201ENSMUST00000193126 2314 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Slc5a4b-201ENSMUST00000120757 3202 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC7.67□□□□□ -1.18
Sox1P53783 Gm45790-201ENSMUST00000211986 1629 ntTSL 5 BASIC7.67□□□□□ -1.18
Sox1P53783 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Sox1P53783 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC7.67□□□□□ -1.18
Sox1P53783 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Sox1P53783 Gm36120-201ENSMUST00000214393 1734 ntTSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Sox1P53783 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Gm19028-201ENSMUST00000189614 1873 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Net1-202ENSMUST00000099946 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 Gm42907-201ENSMUST00000199793 2148 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 Aebp1-201ENSMUST00000102923 3831 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Sox1P53783 Gm14931-201ENSMUST00000111079 253 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm12262-201ENSMUST00000119915 305 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm16200-201ENSMUST00000120385 331 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm12288-201ENSMUST00000121054 1282 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm23111-201ENSMUST00000122652 105 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC7.66□□□□□ -1.18
Sox1P53783 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Gm22895-201ENSMUST00000157508 308 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Sox1P53783 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 Gm29048-201ENSMUST00000185342 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29403-201ENSMUST00000185491 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28234-201ENSMUST00000185657 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28248-201ENSMUST00000186093 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29633-202ENSMUST00000186217 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28829-201ENSMUST00000186231 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28261-201ENSMUST00000186417 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28983-201ENSMUST00000186685 614 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28815-201ENSMUST00000186751 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28608-201ENSMUST00000186860 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28122-201ENSMUST00000187088 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC7.66□□□□□ -1.18
Sox1P53783 Gm28150-201ENSMUST00000187305 614 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28420-201ENSMUST00000187340 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28106-201ENSMUST00000187640 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28698-201ENSMUST00000187734 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29224-201ENSMUST00000187965 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29189-201ENSMUST00000188018 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29476-201ENSMUST00000188397 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29505-201ENSMUST00000188424 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28125-201ENSMUST00000188470 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29391-201ENSMUST00000188545 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29280-201ENSMUST00000188571 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28349-201ENSMUST00000188590 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29652-201ENSMUST00000188622 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28819-206ENSMUST00000188816 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29079-201ENSMUST00000188875 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28213-201ENSMUST00000189183 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29382-201ENSMUST00000189549 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29377-205ENSMUST00000189603 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28327-201ENSMUST00000189638 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28790-201ENSMUST00000189642 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Sox1P53783 Gm28907-201ENSMUST00000189700 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29586-207ENSMUST00000189745 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm29115-201ENSMUST00000189870 615 ntBASIC7.66□□□□□ -1.18
Sox1P53783 Gm28366-201ENSMUST00000190147 615 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms