Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rfx1P48377 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Rfx1P48377 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rfx1P48377 Gm45112-201ENSMUST00000208576 5125 ntBASIC8.62□□□□□ -1.03
Rfx1P48377 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rfx1P48377 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rfx1P48377 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Rfx1P48377 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Rfx1P48377 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Rfx1P48377 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Rfx1P48377 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Rfx1P48377 Gm45876-201ENSMUST00000212698 2709 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Gm20706-201ENSMUST00000175985 2023 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Rfx1P48377 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 Gm26377-201ENSMUST00000102184 108 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Gm5915-201ENSMUST00000116136 454 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Gm12392-201ENSMUST00000118014 938 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Gm11969-201ENSMUST00000118848 356 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Gm13858-201ENSMUST00000118862 671 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Gm13118-201ENSMUST00000120402 549 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Gm14989-201ENSMUST00000120497 207 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Gm9670-201ENSMUST00000121201 540 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 Gm25770-201ENSMUST00000158566 115 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC8.61□□□□□ -1.03
Rfx1P48377 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 Mir199b-201ENSMUST00000175066 110 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 Gm27715-201ENSMUST00000184714 260 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 Gm36935-201ENSMUST00000192526 292 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Gm37322-201ENSMUST00000193409 337 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 Gm43655-201ENSMUST00000197367 222 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Gm43476-201ENSMUST00000197873 405 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Gm43550-201ENSMUST00000200597 303 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Gm42959-201ENSMUST00000202184 212 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC8.61□□□□□ -1.03
Rfx1P48377 AC154687.1-201ENSMUST00000224875 677 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 AC121997.2-202ENSMUST00000227158 939 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC8.61□□□□□ -1.03
Rfx1P48377 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Rfx1P48377 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Rfx1P48377 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC8.61□□□□□ -1.03
Rfx1P48377 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Rfx1P48377 Gm25005-201ENSMUST00000083812 156 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Rfx1P48377 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC8.61□□□□□ -1.03
Rfx1P48377 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC8.61□□□□□ -1.03
Rfx1P48377 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Rfx1P48377 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Rfx1P48377 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Rfx1P48377 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Rfx1P48377 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC8.61□□□□□ -1.03
Rfx1P48377 AC138765.2-202ENSMUST00000228418 3435 ntBASIC8.61□□□□□ -1.03
Rfx1P48377 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Rfx1P48377 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC8.61□□□□□ -1.03
Rfx1P48377 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Rfx1P48377 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Rfx1P48377 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Rfx1P48377 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC8.6□□□□□ -1.03
Rfx1P48377 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Rfx1P48377 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Gm43285-201ENSMUST00000196563 3592 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Rfx1P48377 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Rfx1P48377 AC120347.2-201ENSMUST00000222224 2015 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC8.6□□□□□ -1.03
Rfx1P48377 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Rfx1P48377 Gm14932-201ENSMUST00000117112 453 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Gm12365-201ENSMUST00000117931 568 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Gm16383-201ENSMUST00000118122 232 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Gm15913-201ENSMUST00000118492 331 ntBASIC8.6□□□□□ -1.03
Rfx1P48377 Gm12477-201ENSMUST00000121221 571 ntBASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms