Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
HttP42859 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
HttP42859 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HttP42859 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
HttP42859 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HttP42859 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
HttP42859 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HttP42859 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
HttP42859 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.83□□□□□ -1.32
HttP42859 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC6.83□□□□□ -1.32
HttP42859 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.83□□□□□ -1.32
HttP42859 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC6.83□□□□□ -1.32
HttP42859 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HttP42859 Gm23280-201ENSMUST00000157905 139 ntBASIC6.83□□□□□ -1.32
HttP42859 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
HttP42859 Mir6975-201ENSMUST00000184879 61 ntBASIC6.83□□□□□ -1.32
HttP42859 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.83□□□□□ -1.32
HttP42859 Gm44952-201ENSMUST00000204443 433 ntBASIC6.83□□□□□ -1.32
HttP42859 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.83□□□□□ -1.32
HttP42859 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.83□□□□□ -1.32
HttP42859 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
HttP42859 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
HttP42859 Tdrd1-203ENSMUST00000111606 4914 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HttP42859 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HttP42859 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HttP42859 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HttP42859 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HttP42859 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HttP42859 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
HttP42859 Gm14356-201ENSMUST00000118322 869 ntBASIC6.83□□□□□ -1.32
HttP42859 Gm15331-201ENSMUST00000120225 385 ntBASIC6.83□□□□□ -1.32
HttP42859 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.83□□□□□ -1.32
HttP42859 Gm23965-201ENSMUST00000157969 142 ntBASIC6.83□□□□□ -1.32
HttP42859 Gm23891-201ENSMUST00000158114 138 ntBASIC6.83□□□□□ -1.32
HttP42859 Gm26950-201ENSMUST00000182734 498 ntBASIC6.83□□□□□ -1.32
HttP42859 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.83□□□□□ -1.32
HttP42859 Gm37920-201ENSMUST00000192952 749 ntBASIC6.83□□□□□ -1.32
HttP42859 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HttP42859 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.83□□□□□ -1.32
HttP42859 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.83□□□□□ -1.32
HttP42859 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
HttP42859 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC6.83□□□□□ -1.32
HttP42859 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.83□□□□□ -1.32
HttP42859 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
HttP42859 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.83□□□□□ -1.32
HttP42859 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
HttP42859 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
HttP42859 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC6.82□□□□□ -1.32
HttP42859 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
HttP42859 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
HttP42859 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.82□□□□□ -1.32
HttP42859 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
HttP42859 Gm37121-201ENSMUST00000192219 2556 ntBASIC6.82□□□□□ -1.32
HttP42859 Gm15237-201ENSMUST00000122104 469 ntBASIC6.82□□□□□ -1.32
HttP42859 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC6.82□□□□□ -1.32
HttP42859 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC6.82□□□□□ -1.32
HttP42859 Gm21850-201ENSMUST00000179792 359 ntBASIC6.82□□□□□ -1.32
HttP42859 Gm27543-201ENSMUST00000183562 177 ntBASIC6.82□□□□□ -1.32
HttP42859 Gm45082-201ENSMUST00000206082 601 ntBASIC6.82□□□□□ -1.32
HttP42859 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.82□□□□□ -1.32
HttP42859 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
HttP42859 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.82□□□□□ -1.32
HttP42859 Synj2-209ENSMUST00000115790 4808 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
HttP42859 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.82□□□□□ -1.32
HttP42859 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
HttP42859 Ablim1-203ENSMUST00000104902 5907 ntTSL 5 BASIC6.82□□□□□ -1.32
HttP42859 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.82□□□□□ -1.32
HttP42859 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.82□□□□□ -1.32
HttP42859 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Gm24989-201ENSMUST00000104461 88 ntBASIC6.82□□□□□ -1.32
HttP42859 Gm11737-201ENSMUST00000118713 468 ntBASIC6.82□□□□□ -1.32
HttP42859 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC6.82□□□□□ -1.32
HttP42859 Gm23757-201ENSMUST00000158353 100 ntBASIC6.82□□□□□ -1.32
HttP42859 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC6.82□□□□□ -1.32
HttP42859 AC211878.2-201ENSMUST00000222486 488 ntBASIC6.82□□□□□ -1.32
HttP42859 Gm7731-201ENSMUST00000091759 470 ntBASIC6.82□□□□□ -1.32
HttP42859 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC6.82□□□□□ -1.32
HttP42859 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
HttP42859 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.82□□□□□ -1.32
HttP42859 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
HttP42859 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
HttP42859 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HttP42859 AC159264.1-201ENSMUST00000224844 4257 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms