Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Sdc1P18828 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sdc1P18828 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sdc1P18828 Gm6729-201ENSMUST00000165173 1452 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sdc1P18828 Gm43029-201ENSMUST00000201829 1535 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Sdc1P18828 Gm12684-201ENSMUST00000118675 999 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 Gm15520-201ENSMUST00000132097 1203 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
Sdc1P18828 Gm11545-201ENSMUST00000146507 375 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 Gm27403-201ENSMUST00000184662 214 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Gm27970-201ENSMUST00000184854 407 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 Gm38217-201ENSMUST00000194358 910 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Gm8454-201ENSMUST00000196980 811 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Gm8924-201ENSMUST00000197405 1132 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Gm18430-201ENSMUST00000197534 682 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Gm8952-201ENSMUST00000206828 1102 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Sdc1P18828 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC5.37□□□□□ -1.55
Sdc1P18828 Gm18628-201ENSMUST00000220584 475 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Gm18960-201ENSMUST00000222962 713 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 AC164436.1-201ENSMUST00000227074 772 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Sdc1P18828 Elobl-202ENSMUST00000082339 300 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Gm26063-201ENSMUST00000083378 107 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Sdc1P18828 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Sdc1P18828 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 Gm18248-201ENSMUST00000191164 1846 ntBASIC5.37□□□□□ -1.55
Sdc1P18828 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sdc1P18828 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5.37□□□□□ -1.55
Sdc1P18828 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
Sdc1P18828 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sdc1P18828 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sdc1P18828 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm23192-201ENSMUST00000102434 96 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Hist1h4h-201ENSMUST00000102972 470 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm6746-201ENSMUST00000108774 483 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms