Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Cdx1P18111 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cdx1P18111 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdx1P18111 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Cdx1P18111 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cdx1P18111 Gm15422-201ENSMUST00000117453 541 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 Gm12634-201ENSMUST00000122157 992 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 Gm4887-201ENSMUST00000122230 1053 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Gm24782-201ENSMUST00000157641 132 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 Gm23762-201ENSMUST00000158348 106 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cdx1P18111 Gm7991-201ENSMUST00000168668 591 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 Gm6536-201ENSMUST00000171180 615 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 Gm22702-201ENSMUST00000175372 69 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdx1P18111 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Cdx1P18111 Gm27866-201ENSMUST00000184459 171 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC5.55□□□□□ -1.52
Cdx1P18111 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdx1P18111 Ighv1-30-201ENSMUST00000194082 349 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdx1P18111 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC5.55□□□□□ -1.52
Cdx1P18111 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC5.55□□□□□ -1.52
Cdx1P18111 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdx1P18111 Gm19007-201ENSMUST00000217746 874 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 Gm18618-201ENSMUST00000222211 473 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC5.55□□□□□ -1.52
Cdx1P18111 AC154785.1-201ENSMUST00000223280 572 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 AC133598.4-201ENSMUST00000224577 454 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 AC154692.1-202ENSMUST00000226632 1231 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 AC166822.1-201ENSMUST00000227667 636 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Cdx1P18111 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Cdx1P18111 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Gm20900-201ENSMUST00000078729 472 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Gm24613-201ENSMUST00000083266 130 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Gm45201-201ENSMUST00000207187 2679 ntBASIC5.55□□□□□ -1.52
Cdx1P18111 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Cdx1P18111 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cdx1P18111 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Cdx1P18111 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC5.55□□□□□ -1.52
Cdx1P18111 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC5.55□□□□□ -1.52
Cdx1P18111 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC5.55□□□□□ -1.52
Cdx1P18111 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cdx1P18111 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Cdx1P18111 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Gm44215-201ENSMUST00000204910 2711 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.54□□□□□ -1.52
Cdx1P18111 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Cdx1P18111 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Cdx1P18111 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cdx1P18111 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Gm24139-201ENSMUST00000122780 288 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC5.54□□□□□ -1.52
Cdx1P18111 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC5.54□□□□□ -1.52
Cdx1P18111 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC5.54□□□□□ -1.52
Cdx1P18111 Gm25180-201ENSMUST00000157746 115 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Gm20111-201ENSMUST00000184830 319 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 Gm27458-201ENSMUST00000185108 121 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 Gm29357-201ENSMUST00000186877 698 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 Gm37901-201ENSMUST00000195107 514 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Gm18765-201ENSMUST00000203166 660 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cdx1P18111 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx1P18111 Gm44245-201ENSMUST00000204304 232 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 Gm18690-201ENSMUST00000204488 985 ntBASIC5.54□□□□□ -1.52
Cdx1P18111 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms