Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Lrrc9-203ENSMUST00000161284 3817 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Plppr1-201ENSMUST00000076670 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Cd84-204ENSMUST00000136479 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 A930002I21Rik-201ENSMUST00000060946 1512 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 AC160637.1-201ENSMUST00000214037 3887 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Unc5c-201ENSMUST00000075282 3890 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Sycp1-201ENSMUST00000029448 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Grip1-207ENSMUST00000130387 2780 ntTSL 5 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm42811-201ENSMUST00000201951 2768 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Tfpi-206ENSMUST00000111718 2027 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm11220-201ENSMUST00000118844 475 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm14824-201ENSMUST00000119421 737 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm11198-201ENSMUST00000119771 974 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm15142-201ENSMUST00000121013 856 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm14830-201ENSMUST00000121899 700 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm24534-201ENSMUST00000157949 291 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm24004-201ENSMUST00000158460 178 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm22949-201ENSMUST00000158562 105 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Dnajc5b-204ENSMUST00000165693 955 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm17157-201ENSMUST00000172397 348 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm26748-201ENSMUST00000180406 2972 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm18828-201ENSMUST00000180475 857 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Mir6922-201ENSMUST00000185099 66 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 2310005E17Rik-201ENSMUST00000186644 1187 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 1700100L14Rik-202ENSMUST00000189028 762 ntTSL 2 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm37506-201ENSMUST00000192008 143 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm37586-201ENSMUST00000193654 204 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm43394-201ENSMUST00000198671 694 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm43054-201ENSMUST00000199495 884 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm8686-201ENSMUST00000203028 388 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm45874-201ENSMUST00000212423 346 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm8838-201ENSMUST00000212978 541 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 AC153845.1-201ENSMUST00000213596 428 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 AC134334.1-201ENSMUST00000214277 255 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC6.51□□□□□ -1.37
Hoxd3P09027 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC6.51□□□□□ -1.37
Hoxd3P09027 AC153662.1-201ENSMUST00000222220 270 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 AC173481.1-201ENSMUST00000223351 270 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 AC124524.2-201ENSMUST00000223940 588 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 AC137117.3-201ENSMUST00000226265 485 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 CT030704.1-201ENSMUST00000227521 699 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Tssk4-206ENSMUST00000228041 1217 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Tssk4-207ENSMUST00000228395 1273 ntAPPRIS P5 BASIC6.51□□□□□ -1.37
Hoxd3P09027 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm26244-201ENSMUST00000083435 164 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Khdc1b-201ENSMUST00000147615 2236 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gimap8-201ENSMUST00000078223 3160 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Txk-202ENSMUST00000169534 2344 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Fbxl2-201ENSMUST00000035090 3464 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Triml2-204ENSMUST00000210136 1552 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm38947-201ENSMUST00000209940 2720 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Kng1-203ENSMUST00000089902 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Nfam1-201ENSMUST00000023076 2811 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Gm18639-201ENSMUST00000210442 1769 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Hoxd3P09027 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Morc2b-201ENSMUST00000053896 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Wdpcp-201ENSMUST00000020568 2792 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC6.51□□□□□ -1.37
Hoxd3P09027 Entpd3-201ENSMUST00000047687 3453 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Hoxd3P09027 Nrxn3-202ENSMUST00000110130 3654 ntTSL 2 BASIC6.51□□□□□ -1.37
Hoxd3P09027 Prkrip1-204ENSMUST00000151786 3893 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxd3P09027 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxd3P09027 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxd3P09027 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxd3P09027 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Hoxd3P09027 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 124.5 ms