Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm13130-201ENSMUST00000119195 1166 ntBASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm15188-201ENSMUST00000121264 704 ntBASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm26023-201ENSMUST00000122722 313 ntBASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC5.4□□□□□ -1.54
Hmgb3O54879 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm25722-201ENSMUST00000157498 279 ntBASIC5.4□□□□□ -1.54
Hmgb3O54879 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm27373-201ENSMUST00000184017 184 ntBASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm27507-201ENSMUST00000184199 93 ntBASIC5.4□□□□□ -1.54
Hmgb3O54879 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb3O54879 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm43590-201ENSMUST00000195987 387 ntBASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm43387-201ENSMUST00000196896 1066 ntBASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm43157-201ENSMUST00000198223 412 ntBASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm44705-201ENSMUST00000206719 339 ntBASIC5.4□□□□□ -1.54
Hmgb3O54879 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb3O54879 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC5.4□□□□□ -1.54
Hmgb3O54879 AC151971.2-201ENSMUST00000217540 909 ntBASIC5.4□□□□□ -1.54
Hmgb3O54879 AC158981.1-201ENSMUST00000226943 1205 ntBASIC5.4□□□□□ -1.54
Hmgb3O54879 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb3O54879 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb3O54879 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb3O54879 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb3O54879 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb3O54879 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.4□□□□□ -1.55
Hmgb3O54879 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Hmgb3O54879 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC5.4□□□□□ -1.55
Hmgb3O54879 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Hmgb3O54879 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Hmgb3O54879 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Hmgb3O54879 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.4□□□□□ -1.55
Hmgb3O54879 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Hmgb3O54879 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.4□□□□□ -1.55
Hmgb3O54879 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Hmgb3O54879 Gm43606-201ENSMUST00000195938 3556 ntBASIC5.4□□□□□ -1.55
Hmgb3O54879 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Hmgb3O54879 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Hmgb3O54879 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm22660-201ENSMUST00000104193 130 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm11338-201ENSMUST00000120086 1160 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm11371-201ENSMUST00000120294 385 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm15730-201ENSMUST00000121828 415 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm13237-201ENSMUST00000122151 635 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm14990-201ENSMUST00000122354 445 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC5.39□□□□□ -1.55
Hmgb3O54879 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Hmgb3O54879 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm8895-201ENSMUST00000172300 1223 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm3585-201ENSMUST00000173438 875 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm18254-201ENSMUST00000185699 1204 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm18422-201ENSMUST00000203663 1032 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm8077-201ENSMUST00000209221 1024 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC5.39□□□□□ -1.55
Hmgb3O54879 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Hmgb3O54879 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Hmgb3O54879 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Hmgb3O54879 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Hmgb3O54879 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm38178-201ENSMUST00000194502 2471 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.39□□□□□ -1.55
Hmgb3O54879 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Hmgb3O54879 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb3O54879 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.39□□□□□ -1.55
Hmgb3O54879 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms