Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm22103-201ENSMUST00000116733 121 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm26475-201ENSMUST00000116769 121 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm23620-201ENSMUST00000116812 121 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm25042-201ENSMUST00000116856 121 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm25540-201ENSMUST00000116880 121 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm24179-201ENSMUST00000158925 127 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm23550-201ENSMUST00000179003 121 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm25123-201ENSMUST00000179154 121 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm25353-201ENSMUST00000179366 121 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm22992-201ENSMUST00000179496 121 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm25892-201ENSMUST00000179867 121 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm24092-201ENSMUST00000180257 121 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm27460-201ENSMUST00000184213 100 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm18839-201ENSMUST00000204292 670 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Gm44861-201ENSMUST00000208325 1220 ntBASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc180J3QNE4 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Gm12833-201ENSMUST00000136112 477 ntBASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Gm29357-201ENSMUST00000186877 698 ntBASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Gm44553-201ENSMUST00000206316 2037 ntBASIC12.25□□□□□ -0.45
Ccdc180J3QNE4 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Gm44215-201ENSMUST00000204910 2711 ntBASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Gm12643-201ENSMUST00000116078 374 ntBASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Gm22552-201ENSMUST00000157796 337 ntBASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Gm20778-201ENSMUST00000178524 627 ntBASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Igkv4-73-201ENSMUST00000199760 358 ntBASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc180J3QNE4 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Gm22210-201ENSMUST00000158101 144 ntBASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Gm25246-201ENSMUST00000175476 69 ntBASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Gm5080-201ENSMUST00000220341 743 ntBASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 AC137871.3-201ENSMUST00000226628 225 ntBASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Vmn1r41-205ENSMUST00000227630 827 ntBASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Gm8526-201ENSMUST00000079153 475 ntBASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Gm45528-201ENSMUST00000209854 3145 ntBASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Mgat4a-201ENSMUST00000042161 7030 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc180J3QNE4 Gm22370-201ENSMUST00000102422 83 ntBASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc180J3QNE4 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms