Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx56Q9D0R4 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm21036-201ENSMUST00000207544 2611 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm8624-201ENSMUST00000118083 432 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm13196-201ENSMUST00000118297 379 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm13808-201ENSMUST00000121353 184 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm15538-201ENSMUST00000121410 313 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm14156-201ENSMUST00000121538 483 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm24228-201ENSMUST00000158829 129 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm16571-201ENSMUST00000159112 291 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm5656-201ENSMUST00000171020 1096 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm29369-201ENSMUST00000190674 615 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm42938-201ENSMUST00000198414 1072 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm44722-201ENSMUST00000206473 436 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm45739-201ENSMUST00000213094 388 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm5119-201ENSMUST00000215858 634 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 CT009713.1-201ENSMUST00000224828 853 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Olfr844-201ENSMUST00000054106 930 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Mir129-2-201ENSMUST00000083577 90 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx56Q9D0R4 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm38120-201ENSMUST00000195506 4642 ntBASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm13486-201ENSMUST00000119910 282 ntBASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm15006-201ENSMUST00000121419 1122 ntBASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm24561-201ENSMUST00000175182 95 ntBASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm5787-201ENSMUST00000183049 1038 ntBASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm27684-201ENSMUST00000183778 80 ntBASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm21577-201ENSMUST00000190823 697 ntBASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm4785-201ENSMUST00000191025 751 ntBASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm37560-201ENSMUST00000194289 1000 ntBASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm37720-201ENSMUST00000195497 1241 ntBASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm6057-201ENSMUST00000195927 314 ntBASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm5314-201ENSMUST00000204852 466 ntBASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 Gm9315-201ENSMUST00000222696 908 ntBASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 AC154633.1-201ENSMUST00000223276 449 ntBASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 AC159188.3-201ENSMUST00000224199 880 ntBASIC7.4□□□□□ -1.22
Ddx56Q9D0R4 AC134869.2-201ENSMUST00000225788 421 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms