Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Gm5830-201ENSMUST00000049117 443 ntBASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Mon2-203ENSMUST00000170935 5302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Gm37420-201ENSMUST00000195332 2912 ntBASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Gm26570-201ENSMUST00000180672 342 ntBASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Mir6367-201ENSMUST00000183385 102 ntBASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Gm5229-201ENSMUST00000039375 354 ntBASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC6.56□□□□□ -1.36
Cdh23Q99PF4 CR974429.2-201ENSMUST00000221883 1696 ntBASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Ndst3-206ENSMUST00000154668 5570 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cdh23Q99PF4 Gm19972-201ENSMUST00000218180 5664 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm15901-201ENSMUST00000117663 941 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm18833-201ENSMUST00000173218 862 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm18969-201ENSMUST00000189423 730 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm13626-201ENSMUST00000119435 402 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm9320-201ENSMUST00000184151 473 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm37235-201ENSMUST00000195171 59 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm25758-201ENSMUST00000103987 129 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm12400-201ENSMUST00000120915 1003 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm22820-201ENSMUST00000157205 329 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 AC123665.6-201ENSMUST00000228568 538 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.55□□□□□ -1.36
Cdh23Q99PF4 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cdh23Q99PF4 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms