Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Pcdhb3Q91XZ7 Grip1-215ENSMUST00000148954 3293 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Pcdhb3Q91XZ7 Gm37821-201ENSMUST00000195476 1843 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm26597-201ENSMUST00000181648 1477 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm19093-201ENSMUST00000210671 1454 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Naalad2-204ENSMUST00000166825 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Spx-204ENSMUST00000211094 1510 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Ighv1-72-201ENSMUST00000103541 396 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm24794-201ENSMUST00000104288 140 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm12386-201ENSMUST00000117380 688 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Olfr1343-ps1-201ENSMUST00000117414 914 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm15186-201ENSMUST00000119345 563 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm13655-201ENSMUST00000119695 745 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm11999-201ENSMUST00000145789 813 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Mir2139-201ENSMUST00000158669 95 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm17068-201ENSMUST00000163135 980 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Zfp419-201ENSMUST00000173446 916 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm24369-201ENSMUST00000175387 96 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm20648-201ENSMUST00000175815 328 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm21737-201ENSMUST00000178112 664 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm20874-201ENSMUST00000178356 663 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm21744-201ENSMUST00000178403 662 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 1700009J07Rik-201ENSMUST00000178996 912 ntTSL 5 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm20901-201ENSMUST00000180177 664 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm6410-201ENSMUST00000181337 1105 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 S100a11-ps-201ENSMUST00000181735 306 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm26931-201ENSMUST00000182273 609 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm27013-201ENSMUST00000182441 1024 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm28419-201ENSMUST00000189108 475 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm28090-201ENSMUST00000189458 664 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm21647-201ENSMUST00000189755 664 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm8388-201ENSMUST00000193000 756 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm44538-201ENSMUST00000205615 348 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm8667-201ENSMUST00000211112 449 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Olfr809-203ENSMUST00000218237 1100 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm35412-201ENSMUST00000220437 999 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm21941-201ENSMUST00000221121 562 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 AC117237.1-201ENSMUST00000224035 395 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 4930428N03Rik-205ENSMUST00000225654 892 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 CT030238.3-201ENSMUST00000227352 875 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 AC154528.1-201ENSMUST00000228584 527 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 n-R5s86-201ENSMUST00000083215 119 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Wnk1-218ENSMUST00000161512 1426 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm26520-201ENSMUST00000180719 1423 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Ap1s3-203ENSMUST00000162342 2876 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Pgk2-201ENSMUST00000033585 1592 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Gm12263-201ENSMUST00000119105 1482 ntBASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Pcdhb3Q91XZ7 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Pcdhb3Q91XZ7 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.25□□□□□ -1.09
Pcdhb3Q91XZ7 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
Pcdhb3Q91XZ7 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Pcdhb3Q91XZ7 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC8.25□□□□□ -1.09
Pcdhb3Q91XZ7 Prim1-205ENSMUST00000178041 1536 ntAPPRIS ALT1 TSL 5 BASIC8.25□□□□□ -1.09
Pcdhb3Q91XZ7 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Pcdhb3Q91XZ7 CR974429.2-201ENSMUST00000221883 1696 ntBASIC8.25□□□□□ -1.09
Pcdhb3Q91XZ7 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Pcdhb3Q91XZ7 4933402E13Rik-201ENSMUST00000051414 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Pcdhb3Q91XZ7 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Pcdhb3Q91XZ7 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Pcdhb3Q91XZ7 Mir466n-201ENSMUST00000104798 94 ntBASIC8.25□□□□□ -1.09
Pcdhb3Q91XZ7 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Pcdhb3Q91XZ7 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC8.25□□□□□ -1.09
Pcdhb3Q91XZ7 Gm15010-201ENSMUST00000117153 407 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms