Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 1700123J17Rik-201ENSMUST00000206035 1805 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm23484-201ENSMUST00000104178 131 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm22660-201ENSMUST00000104193 130 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Mir467g-201ENSMUST00000116906 120 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm15159-201ENSMUST00000117062 764 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm12090-201ENSMUST00000118692 758 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm11688-201ENSMUST00000122145 308 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm24635-201ENSMUST00000122712 128 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm42932-201ENSMUST00000197280 744 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm5554-201ENSMUST00000199726 1206 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm44252-201ENSMUST00000204187 330 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm44982-201ENSMUST00000208795 471 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm40853-201ENSMUST00000221342 582 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm9255-201ENSMUST00000223225 581 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 AC146596.1-201ENSMUST00000223507 223 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 AC160930.1-201ENSMUST00000227194 337 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm18908-201ENSMUST00000207125 1483 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 CT009515.4-201ENSMUST00000228165 1494 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Gm43776-201ENSMUST00000199729 2914 ntBASIC8.57□□□□□ -1.04
Trim47Q8C0E3 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Olfr1312-202ENSMUST00000213582 2891 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm37140-201ENSMUST00000192914 1684 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm44228-201ENSMUST00000204888 2026 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 AC130219.1-201ENSMUST00000228406 3433 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm38331-201ENSMUST00000195719 2671 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm6746-201ENSMUST00000108774 483 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm6490-201ENSMUST00000111862 461 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm13728-201ENSMUST00000117471 400 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm11443-201ENSMUST00000118790 479 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm13521-201ENSMUST00000118922 866 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm5943-201ENSMUST00000119458 459 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm9378-201ENSMUST00000120315 471 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm11962-201ENSMUST00000145746 255 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm22408-201ENSMUST00000174925 65 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms