Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm44198-201ENSMUST00000203063 2636 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Aplnr-201ENSMUST00000057019 3699 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Trim35Q8C006 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Aqp7-201ENSMUST00000030136 2527 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Sall1-201ENSMUST00000034090 5265 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm5910-201ENSMUST00000211819 1746 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Pfkfb2-201ENSMUST00000050406 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Cdkl4-201ENSMUST00000086545 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm10302-201ENSMUST00000174433 3535 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Metap2-210ENSMUST00000181217 1984 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm28800-201ENSMUST00000186230 2243 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Prpf6-201ENSMUST00000002529 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Trim35Q8C006 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Trim35Q8C006 Fhl3-202ENSMUST00000106199 1139 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trim35Q8C006 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Rps19-ps3-201ENSMUST00000116174 426 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm13804-201ENSMUST00000119552 172 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm12989-201ENSMUST00000122331 731 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm25321-201ENSMUST00000122558 102 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC9.54□□□□□ -0.88
Trim35Q8C006 4933424L21Rik-201ENSMUST00000142486 1186 ntTSL 5 BASIC9.54□□□□□ -0.88
Trim35Q8C006 4930479D17Rik-201ENSMUST00000146754 740 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Dnajc5b-204ENSMUST00000165693 955 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Trim35Q8C006 Ear-ps4-201ENSMUST00000166834 450 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm20657-201ENSMUST00000177079 515 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm25670-201ENSMUST00000178423 107 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm10045-201ENSMUST00000178657 483 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm26239-201ENSMUST00000178842 107 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm24267-201ENSMUST00000179841 107 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm27540-201ENSMUST00000184950 187 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm28390-201ENSMUST00000185212 700 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Etv3l-201ENSMUST00000193196 325 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm2071-201ENSMUST00000193335 774 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm29808-201ENSMUST00000194419 468 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm4259-201ENSMUST00000206489 758 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trim35Q8C006 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 AC166358.3-201ENSMUST00000221456 181 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 CT030184.1-201ENSMUST00000222393 416 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm5513-201ENSMUST00000072982 1218 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm23515-201ENSMUST00000082829 107 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm24292-201ENSMUST00000082888 107 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm23458-201ENSMUST00000083257 169 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Mir341-201ENSMUST00000093593 96 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trim35Q8C006 Pnpla7-201ENSMUST00000045295 4574 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Cabs1-201ENSMUST00000008051 1505 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm42589-201ENSMUST00000199097 1751 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Abcb1a-201ENSMUST00000047753 4997 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Mpo-201ENSMUST00000020779 2750 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Slc14a2-201ENSMUST00000025434 2793 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trim35Q8C006 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm10790-202ENSMUST00000221285 1696 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Mink1-204ENSMUST00000102558 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Add2-209ENSMUST00000204059 8182 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Slc2a9-201ENSMUST00000005238 3243 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Gm38365-201ENSMUST00000195720 2993 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 CT010486.2-201ENSMUST00000224003 2714 ntBASIC9.54□□□□□ -0.88
Trim35Q8C006 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trim35Q8C006 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Zkscan1-204ENSMUST00000110963 4670 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm37250-201ENSMUST00000194919 2388 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 CT025642.3-201ENSMUST00000225503 4086 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 Lrrc55-202ENSMUST00000111601 2900 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Rasgrf1-203ENSMUST00000189545 4766 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Sfi1-201ENSMUST00000066391 3898 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Serpinb6a-202ENSMUST00000043552 1547 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Nup107-201ENSMUST00000064848 3114 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Mylk3-201ENSMUST00000034133 3696 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 A330044P14Rik-202ENSMUST00000203311 1683 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 Sult1a1-203ENSMUST00000106373 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm7609-202ENSMUST00000113407 853 ntTSL 2 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm6584-201ENSMUST00000119671 447 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm13450-201ENSMUST00000121107 167 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm15247-201ENSMUST00000124513 403 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm12542-201ENSMUST00000133015 647 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Lsm6-204ENSMUST00000146824 541 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm11608-202ENSMUST00000153049 877 ntTSL 3 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm17421-201ENSMUST00000167845 674 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm5652-201ENSMUST00000182336 1008 ntBASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms