Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm4904-201ENSMUST00000178243 1195 ntBASIC9.46□□□□□ -0.9
Usp47Q8BY87 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC9.46□□□□□ -0.9
Usp47Q8BY87 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC9.46□□□□□ -0.9
Usp47Q8BY87 Gm18781-201ENSMUST00000211252 924 ntBASIC9.46□□□□□ -0.9
Usp47Q8BY87 Gm4556-201ENSMUST00000217808 355 ntBASIC9.46□□□□□ -0.9
Usp47Q8BY87 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Usp47Q8BY87 CT030645.2-201ENSMUST00000224321 1012 ntBASIC9.46□□□□□ -0.9
Usp47Q8BY87 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Usp47Q8BY87 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Usp47Q8BY87 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Usp47Q8BY87 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
Usp47Q8BY87 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Usp47Q8BY87 Gm45477-201ENSMUST00000200213 5498 ntBASIC9.45□□□□□ -0.9
Usp47Q8BY87 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp47Q8BY87 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Gm37772-201ENSMUST00000191635 1394 ntBASIC9.45□□□□□ -0.9
Usp47Q8BY87 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Gm15181-201ENSMUST00000120142 177 ntBASIC9.45□□□□□ -0.9
Usp47Q8BY87 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC9.45□□□□□ -0.9
Usp47Q8BY87 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Gm29509-201ENSMUST00000185716 321 ntBASIC9.45□□□□□ -0.9
Usp47Q8BY87 Gm18447-201ENSMUST00000187501 307 ntBASIC9.45□□□□□ -0.9
Usp47Q8BY87 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Gm28665-201ENSMUST00000189269 670 ntBASIC9.45□□□□□ -0.9
Usp47Q8BY87 Gm44265-201ENSMUST00000203631 465 ntBASIC9.45□□□□□ -0.9
Usp47Q8BY87 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC9.45□□□□□ -0.9
Usp47Q8BY87 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC9.45□□□□□ -0.9
Usp47Q8BY87 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp47Q8BY87 AC164437.5-201ENSMUST00000227235 4414 ntBASIC9.45□□□□□ -0.9
Usp47Q8BY87 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Usp47Q8BY87 Gm232-201ENSMUST00000216549 2559 ntBASIC9.44□□□□□ -0.9
Usp47Q8BY87 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp47Q8BY87 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC9.44□□□□□ -0.9
Usp47Q8BY87 AC138284.1-201ENSMUST00000214258 3236 ntBASIC9.44□□□□□ -0.9
Usp47Q8BY87 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC9.44□□□□□ -0.9
Usp47Q8BY87 Gm8250-201ENSMUST00000117398 774 ntBASIC9.44□□□□□ -0.9
Usp47Q8BY87 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC9.44□□□□□ -0.9
Usp47Q8BY87 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Mir6367-201ENSMUST00000183385 102 ntBASIC9.44□□□□□ -0.9
Usp47Q8BY87 AC117240.1-201ENSMUST00000199436 61 ntBASIC9.44□□□□□ -0.9
Usp47Q8BY87 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Usp47Q8BY87 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Usp47Q8BY87 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp47Q8BY87 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Usp47Q8BY87 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC9.43□□□□□ -0.9
Usp47Q8BY87 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Gm13455-201ENSMUST00000118767 517 ntBASIC9.43□□□□□ -0.9
Usp47Q8BY87 Gm13207-201ENSMUST00000119862 773 ntBASIC9.43□□□□□ -0.9
Usp47Q8BY87 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Usp47Q8BY87 Gm26381-201ENSMUST00000174895 92 ntBASIC9.43□□□□□ -0.9
Usp47Q8BY87 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms