Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usp40Q8BWR4 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Gm7658-201ENSMUST00000119064 1124 ntBASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Sms-ps-201ENSMUST00000121773 1101 ntBASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Gm26509-201ENSMUST00000180947 948 ntBASIC9.32□□□□□ -0.92
Usp40Q8BWR4 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Gm28438-201ENSMUST00000188299 345 ntBASIC9.32□□□□□ -0.92
Usp40Q8BWR4 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Gm37213-201ENSMUST00000193077 586 ntBASIC9.32□□□□□ -0.92
Usp40Q8BWR4 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Gm43235-201ENSMUST00000200121 297 ntBASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Gm44705-201ENSMUST00000206719 339 ntBASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 n-R5s97-201ENSMUST00000082585 113 ntBASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Olfr687-201ENSMUST00000098154 938 ntBASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp40Q8BWR4 Gm44652-201ENSMUST00000208648 2854 ntBASIC9.32□□□□□ -0.92
Usp40Q8BWR4 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Gm22552-201ENSMUST00000157796 337 ntBASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Gm23276-201ENSMUST00000157913 138 ntBASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Gm8902-201ENSMUST00000174341 1096 ntBASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Gm43033-201ENSMUST00000199682 425 ntBASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Gm43748-201ENSMUST00000202329 1233 ntBASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 AC154573.2-201ENSMUST00000224174 378 ntBASIC9.31□□□□□ -0.92
Usp40Q8BWR4 AC154838.2-201ENSMUST00000226602 747 ntBASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Gm10205-201ENSMUST00000087431 234 ntBASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Gm43411-201ENSMUST00000196235 1579 ntBASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp40Q8BWR4 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Usp40Q8BWR4 n-R5s178-201ENSMUST00000104249 114 ntBASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Gm12507-201ENSMUST00000119155 415 ntBASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Gm11504-201ENSMUST00000120211 173 ntBASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Gm6074-201ENSMUST00000193340 451 ntBASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Ighv1-14-201ENSMUST00000194015 402 ntBASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Gm18600-201ENSMUST00000207205 505 ntBASIC9.3□□□□□ -0.92
Usp40Q8BWR4 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Usp40Q8BWR4 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms