Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm23674-201ENSMUST00000157473 131 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm23896-201ENSMUST00000158109 130 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm22523-201ENSMUST00000158696 100 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm17217-201ENSMUST00000166613 469 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm43689-201ENSMUST00000195951 427 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm5418-201ENSMUST00000206932 528 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm5055-201ENSMUST00000215697 581 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 AC110816.1-201ENSMUST00000218559 980 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 AC137871.3-201ENSMUST00000226628 225 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 AC132833.4-201ENSMUST00000228313 203 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm26442-201ENSMUST00000082588 153 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm42490-201ENSMUST00000198595 2064 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm9226-201ENSMUST00000188352 3489 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm21152-201ENSMUST00000190271 3483 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm6542-201ENSMUST00000153606 772 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm25550-201ENSMUST00000158079 128 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm25244-201ENSMUST00000178089 132 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm26607-201ENSMUST00000180661 867 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm28620-201ENSMUST00000190463 439 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm43555-201ENSMUST00000196588 310 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm7463-201ENSMUST00000201541 547 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm17849-201ENSMUST00000219788 853 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm10205-201ENSMUST00000087431 234 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Olfr687-201ENSMUST00000098154 938 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm20775-201ENSMUST00000100115 1851 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC7.87□□□□□ -1.15
Ddx55Q6ZPL9 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ddx55Q6ZPL9 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ddx55Q6ZPL9 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ddx55Q6ZPL9 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC7.86□□□□□ -1.15
Ddx55Q6ZPL9 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ddx55Q6ZPL9 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ddx55Q6ZPL9 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ddx55Q6ZPL9 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.86□□□□□ -1.15
Ddx55Q6ZPL9 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.86□□□□□ -1.15
Ddx55Q6ZPL9 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ddx55Q6ZPL9 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Ddx55Q6ZPL9 Gm37151-201ENSMUST00000194631 5007 ntBASIC7.86□□□□□ -1.15
Ddx55Q6ZPL9 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Ddx55Q6ZPL9 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.86□□□□□ -1.15
Ddx55Q6ZPL9 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC7.86□□□□□ -1.15
Ddx55Q6ZPL9 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms