Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Shank3Q4ACU6 Gm13416-201ENSMUST00000117264 1612 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm13428-201ENSMUST00000117540 365 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm37234-201ENSMUST00000193259 1441 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 CT485607.3-201ENSMUST00000213361 672 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm3785-201ENSMUST00000221000 202 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm37423-201ENSMUST00000194246 3342 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 AC135119.1-204ENSMUST00000228036 2663 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm14935-201ENSMUST00000121528 1708 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Bmpr1b-201ENSMUST00000029948 5349 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm15801-201ENSMUST00000120920 522 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm8783-201ENSMUST00000159764 522 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm18833-201ENSMUST00000173218 862 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm8860-201ENSMUST00000193160 445 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm4742-201ENSMUST00000200261 771 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm2225-201ENSMUST00000209570 377 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm9321-201ENSMUST00000221179 778 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Gm5582-201ENSMUST00000075251 522 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC8.29□□□□□ -1.08
Shank3Q4ACU6 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Gria1-202ENSMUST00000094179 5399 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Trip12-207ENSMUST00000186648 6442 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Gm37864-201ENSMUST00000195308 3075 ntBASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Ank2-201ENSMUST00000044443 5775 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 AC107453.4-201ENSMUST00000227068 1817 ntBASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 AC138284.1-201ENSMUST00000214258 3236 ntBASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Ptprb-201ENSMUST00000092167 11911 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Gm22552-201ENSMUST00000157796 337 ntBASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Gm23662-201ENSMUST00000158046 111 ntBASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Gm23806-201ENSMUST00000175157 109 ntBASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Gm28883-201ENSMUST00000189256 369 ntBASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Mylf-ps-201ENSMUST00000222174 421 ntBASIC8.28□□□□□ -1.08
Shank3Q4ACU6 n-R5s36-201ENSMUST00000082998 119 ntBASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 AC141476.1-201ENSMUST00000224988 3387 ntBASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Trio-210ENSMUST00000227337 6375 ntBASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Shank3Q4ACU6 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Shank3Q4ACU6 Gm6786-201ENSMUST00000203165 1915 ntBASIC8.27□□□□□ -1.08
Shank3Q4ACU6 Gm5949-201ENSMUST00000213468 1421 ntBASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Gm45767-201ENSMUST00000212778 4561 ntBASIC8.27□□□□□ -1.09
Shank3Q4ACU6 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms