Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Gm11928-201ENSMUST00000119323 437 ntBASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Gm15538-201ENSMUST00000121410 313 ntBASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Gm24925-201ENSMUST00000178157 107 ntBASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Gm9114-201ENSMUST00000188558 997 ntBASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Gm412-201ENSMUST00000193360 948 ntBASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Gm42424-201ENSMUST00000198319 376 ntBASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Gm8575-201ENSMUST00000210262 521 ntBASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 AC134860.4-201ENSMUST00000223592 978 ntBASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Gm15189-201ENSMUST00000121164 1966 ntBASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp48Q3V0C5 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm45737-201ENSMUST00000208344 1612 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm4927-201ENSMUST00000219548 1318 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm14375-201ENSMUST00000119490 855 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Mup-ps13-201ENSMUST00000120662 545 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Mup-ps1-201ENSMUST00000120720 544 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm11609-201ENSMUST00000121926 793 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm22143-201ENSMUST00000157401 203 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm16026-205ENSMUST00000162923 641 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm5445-201ENSMUST00000180224 480 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm18797-201ENSMUST00000190809 1174 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm43287-201ENSMUST00000197747 600 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm44227-201ENSMUST00000203576 241 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm17822-201ENSMUST00000204307 351 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm46103-201ENSMUST00000217614 341 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 AC140210.1-201ENSMUST00000224961 534 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm24036-201ENSMUST00000082868 156 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm16072-201ENSMUST00000119574 2377 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Gm21043-201ENSMUST00000199316 1517 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Tcf24-201ENSMUST00000097824 2639 ntBASIC9.09□□□□□ -0.95
Usp48Q3V0C5 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp48Q3V0C5 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC9.09□□□□□ -0.96
Usp48Q3V0C5 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC9.09□□□□□ -0.96
Usp48Q3V0C5 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp48Q3V0C5 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms