Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Gm30708-201ENSMUST00000202183 312 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 Gm7554-201ENSMUST00000202282 574 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Gm18600-201ENSMUST00000207205 505 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC6.5□□□□□ -1.37
Cdx2P43241 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.5□□□□□ -1.37
Cdx2P43241 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Gm46379-201ENSMUST00000222551 265 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cdx2P43241 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cdx2P43241 Gm21731-201ENSMUST00000079524 489 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 n-R5s97-201ENSMUST00000082585 113 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 Gm26442-201ENSMUST00000082588 153 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdx2P43241 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cdx2P43241 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cdx2P43241 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cdx2P43241 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
Cdx2P43241 Gm8844-201ENSMUST00000119460 2614 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 CR974429.2-201ENSMUST00000221883 1696 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 AC122356.1-202ENSMUST00000227328 2758 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Cdx2P43241 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cdx2P43241 Gm15149-201ENSMUST00000119370 360 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 Gm14614-201ENSMUST00000119873 384 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 Gm11504-201ENSMUST00000120211 173 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 Gm15502-201ENSMUST00000121449 208 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 Gm6977-201ENSMUST00000121568 512 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 Gm11879-201ENSMUST00000121885 702 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 Gm12518-201ENSMUST00000122075 779 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 Gm8648-201ENSMUST00000122457 221 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.49□□□□□ -1.37
Cdx2P43241 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 Gm25387-201ENSMUST00000157813 132 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 Gm23896-201ENSMUST00000158109 130 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Cdx2P43241 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cdx2P43241 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
Cdx2P43241 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 Gm7492-201ENSMUST00000201745 725 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC6.49□□□□□ -1.37
Cdx2P43241 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cdx2P43241 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Cdx2P43241 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC6.49□□□□□ -1.37
Cdx2P43241 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Cdx2P43241 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.49□□□□□ -1.37
Cdx2P43241 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Cdx2P43241 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Cdx2P43241 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx2P43241 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx2P43241 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx2P43241 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx2P43241 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx2P43241 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx2P43241 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.48□□□□□ -1.37
Cdx2P43241 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx2P43241 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx2P43241 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Cdx2P43241 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx2P43241 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx2P43241 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Cdx2P43241 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx2P43241 n-R5s16-201ENSMUST00000104555 119 ntBASIC6.48□□□□□ -1.37
Cdx2P43241 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx2P43241 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.48□□□□□ -1.37
Cdx2P43241 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.48□□□□□ -1.37
Cdx2P43241 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms