Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Chd1P40201 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Chd1P40201 Gm15568-201ENSMUST00000118589 1213 ntBASIC9.99□□□□□ -0.81
Chd1P40201 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC9.99□□□□□ -0.81
Chd1P40201 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC9.99□□□□□ -0.81
Chd1P40201 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC9.99□□□□□ -0.81
Chd1P40201 Gm26372-201ENSMUST00000157831 236 ntBASIC9.99□□□□□ -0.81
Chd1P40201 Gm23757-201ENSMUST00000158353 100 ntBASIC9.99□□□□□ -0.81
Chd1P40201 Gm28080-201ENSMUST00000188552 722 ntBASIC9.99□□□□□ -0.81
Chd1P40201 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd1P40201 Gm37235-201ENSMUST00000195171 59 ntBASIC9.99□□□□□ -0.81
Chd1P40201 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Chd1P40201 AC153961.2-201ENSMUST00000218877 164 ntBASIC9.99□□□□□ -0.81
Chd1P40201 AC134254.2-201ENSMUST00000221262 170 ntBASIC9.99□□□□□ -0.81
Chd1P40201 AC166358.3-201ENSMUST00000221456 181 ntBASIC9.99□□□□□ -0.81
Chd1P40201 AC125543.4-201ENSMUST00000223385 117 ntBASIC9.99□□□□□ -0.81
Chd1P40201 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Chd1P40201 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC9.99□□□□□ -0.81
Chd1P40201 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC9.99□□□□□ -0.81
Chd1P40201 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC9.99□□□□□ -0.81
Chd1P40201 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Chd1P40201 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd1P40201 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chd1P40201 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd1P40201 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd1P40201 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chd1P40201 Gm17841-201ENSMUST00000210711 2425 ntBASIC9.99□□□□□ -0.81
Chd1P40201 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Chd1P40201 Gm7961-201ENSMUST00000201338 1436 ntBASIC9.99□□□□□ -0.81
Chd1P40201 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC9.99□□□□□ -0.81
Chd1P40201 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd1P40201 Gm13007-201ENSMUST00000121866 365 ntBASIC9.99□□□□□ -0.81
Chd1P40201 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC9.99□□□□□ -0.81
Chd1P40201 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC9.99□□□□□ -0.81
Chd1P40201 Mir1970-201ENSMUST00000157839 104 ntBASIC9.99□□□□□ -0.81
Chd1P40201 Gm23806-201ENSMUST00000175157 109 ntBASIC9.99□□□□□ -0.81
Chd1P40201 Mir5125-201ENSMUST00000175240 79 ntBASIC9.99□□□□□ -0.81
Chd1P40201 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Chd1P40201 Gm7713-201ENSMUST00000181201 1007 ntBASIC9.99□□□□□ -0.81
Chd1P40201 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC9.99□□□□□ -0.81
Chd1P40201 Mir219c-201ENSMUST00000199860 60 ntBASIC9.99□□□□□ -0.81
Chd1P40201 AC107711.2-203ENSMUST00000227827 762 ntBASIC9.99□□□□□ -0.81
Chd1P40201 AC170810.1-201ENSMUST00000228267 672 ntBASIC9.99□□□□□ -0.81
Chd1P40201 Gm5830-201ENSMUST00000049117 443 ntBASIC9.99□□□□□ -0.81
Chd1P40201 Gm37762-201ENSMUST00000194515 3561 ntBASIC9.99□□□□□ -0.81
Chd1P40201 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Chd1P40201 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd1P40201 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd1P40201 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Chd1P40201 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Chd1P40201 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd1P40201 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd1P40201 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd1P40201 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd1P40201 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd1P40201 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Chd1P40201 Gm24230-201ENSMUST00000104313 129 ntBASIC9.98□□□□□ -0.81
Chd1P40201 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Chd1P40201 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Chd1P40201 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd1P40201 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC9.98□□□□□ -0.81
Chd1P40201 Mir6994-201ENSMUST00000198985 73 ntBASIC9.98□□□□□ -0.81
Chd1P40201 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd1P40201 Gm28112-201ENSMUST00000190898 1875 ntBASIC9.98□□□□□ -0.81
Chd1P40201 AC154141.1-201ENSMUST00000208403 4136 ntBASIC9.98□□□□□ -0.81
Chd1P40201 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd1P40201 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Chd1P40201 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Chd1P40201 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd1P40201 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd1P40201 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Chd1P40201 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd1P40201 Stil-201ENSMUST00000030490 5285 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd1P40201 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd1P40201 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC9.97□□□□□ -0.81
Chd1P40201 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Chd1P40201 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Chd1P40201 Gm37864-201ENSMUST00000195308 3075 ntBASIC9.97□□□□□ -0.81
Chd1P40201 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Chd1P40201 Gm43187-201ENSMUST00000200652 2397 ntBASIC9.97□□□□□ -0.81
Chd1P40201 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Chd1P40201 Gm16057-201ENSMUST00000120811 759 ntBASIC9.97□□□□□ -0.81
Chd1P40201 Gm12685-201ENSMUST00000121702 214 ntBASIC9.97□□□□□ -0.81
Chd1P40201 Gm24216-201ENSMUST00000158259 117 ntBASIC9.97□□□□□ -0.81
Chd1P40201 Gm22420-201ENSMUST00000178795 126 ntBASIC9.97□□□□□ -0.81
Chd1P40201 Gm28017-201ENSMUST00000183434 126 ntBASIC9.97□□□□□ -0.81
Chd1P40201 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC9.97□□□□□ -0.81
Chd1P40201 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC9.97□□□□□ -0.81
Chd1P40201 Gm13821-201ENSMUST00000202029 3201 ntBASIC9.97□□□□□ -0.81
Chd1P40201 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Chd1P40201 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd1P40201 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC9.97□□□□□ -0.81
Chd1P40201 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd1P40201 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Chd1P40201 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Chd1P40201 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Chd1P40201 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Chd1P40201 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC9.96□□□□□ -0.81
Chd1P40201 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Chd1P40201 Gm13887-201ENSMUST00000119009 344 ntBASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms