Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Col2a1P28481 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col2a1P28481 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col2a1P28481 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Col2a1P28481 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC7.62□□□□□ -1.19
Col2a1P28481 Gm6181-201ENSMUST00000117187 264 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col2a1P28481 Gm22518-201ENSMUST00000158267 68 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Gm25244-201ENSMUST00000178089 132 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC7.62□□□□□ -1.19
Col2a1P28481 Mir3473e-201ENSMUST00000183932 110 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Gm3321-201ENSMUST00000200603 1129 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC7.62□□□□□ -1.19
Col2a1P28481 Gm18781-201ENSMUST00000211252 924 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col2a1P28481 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC7.62□□□□□ -1.19
Col2a1P28481 AC073562.1-201ENSMUST00000222117 401 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Mir3068-201ENSMUST00000083004 136 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Gm37510-201ENSMUST00000194151 4762 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Col2a1P28481 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Col2a1P28481 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Col2a1P28481 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col2a1P28481 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Col2a1P28481 Gm38009-201ENSMUST00000194884 3341 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col2a1P28481 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
Col2a1P28481 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Col2a1P28481 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col2a1P28481 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Col2a1P28481 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col2a1P28481 Gm37367-201ENSMUST00000191771 2602 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col2a1P28481 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col2a1P28481 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col2a1P28481 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col2a1P28481 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col2a1P28481 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col2a1P28481 Gm23311-201ENSMUST00000104152 134 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col2a1P28481 Gm11271-201ENSMUST00000116054 440 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Gm7058-201ENSMUST00000119209 902 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Gm4853-201ENSMUST00000119359 394 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col2a1P28481 Gm29160-201ENSMUST00000190094 699 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Gm5853-201ENSMUST00000197183 632 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Gm43233-201ENSMUST00000200491 616 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Gm43748-201ENSMUST00000202329 1233 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC7.62□□□□□ -1.19
Col2a1P28481 AC104906.1-201ENSMUST00000218122 913 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 AC122290.1-201ENSMUST00000225631 1078 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 CT025667.1-201ENSMUST00000225872 382 ntBASIC7.62□□□□□ -1.19
Col2a1P28481 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.61□□□□□ -1.19
Col2a1P28481 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.61□□□□□ -1.19
Col2a1P28481 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC7.61□□□□□ -1.19
Col2a1P28481 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 AC121286.2-201ENSMUST00000218069 2470 ntBASIC7.61□□□□□ -1.19
Col2a1P28481 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC7.61□□□□□ -1.19
Col2a1P28481 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Col2a1P28481 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Col2a1P28481 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Col2a1P28481 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.61□□□□□ -1.19
Col2a1P28481 Gm22370-201ENSMUST00000102422 83 ntBASIC7.61□□□□□ -1.19
Col2a1P28481 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Col2a1P28481 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.61□□□□□ -1.19
Col2a1P28481 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm12442-201ENSMUST00000118372 338 ntBASIC7.61□□□□□ -1.19
Col2a1P28481 Gm4342-201ENSMUST00000118982 367 ntBASIC7.61□□□□□ -1.19
Col2a1P28481 Gm13207-201ENSMUST00000119862 773 ntBASIC7.61□□□□□ -1.19
Col2a1P28481 Gm15618-201ENSMUST00000121610 452 ntBASIC7.61□□□□□ -1.19
Col2a1P28481 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm10177-201ENSMUST00000160052 444 ntBASIC7.61□□□□□ -1.19
Col2a1P28481 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC7.61□□□□□ -1.19
Col2a1P28481 Gm17137-202ENSMUST00000165729 957 ntBASIC7.61□□□□□ -1.19
Col2a1P28481 Mir6367-201ENSMUST00000183385 102 ntBASIC7.61□□□□□ -1.19
Col2a1P28481 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Col2a1P28481 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col2a1P28481 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms