Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
P20040 CT030185.1-201ENSMUST00000222940 2289 ntBASIC5.98□□□□□ -1.45
P20040 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
P20040 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
P20040 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
P20040 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
P20040 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
P20040 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
P20040 Gm43421-201ENSMUST00000200044 2905 ntBASIC5.98□□□□□ -1.45
P20040 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
P20040 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
P20040 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
P20040 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC5.98□□□□□ -1.45
P20040 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
P20040 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
P20040 Gm45073-201ENSMUST00000207688 4247 ntBASIC5.97□□□□□ -1.45
P20040 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Gm37925-201ENSMUST00000195352 4255 ntBASIC5.97□□□□□ -1.45
P20040 Gm26417-201ENSMUST00000104274 135 ntBASIC5.97□□□□□ -1.45
P20040 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
P20040 Gm13423-201ENSMUST00000117205 888 ntBASIC5.97□□□□□ -1.45
P20040 Gm11858-201ENSMUST00000117935 838 ntBASIC5.97□□□□□ -1.45
P20040 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC5.97□□□□□ -1.45
P20040 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC5.97□□□□□ -1.45
P20040 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC5.97□□□□□ -1.45
P20040 Gm16284-201ENSMUST00000140995 400 ntBASIC5.97□□□□□ -1.45
P20040 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC5.97□□□□□ -1.45
P20040 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC5.97□□□□□ -1.45
P20040 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Gm23762-201ENSMUST00000158348 106 ntBASIC5.97□□□□□ -1.45
P20040 Gm16138-201ENSMUST00000159341 821 ntBASIC5.97□□□□□ -1.45
P20040 Gm3326-201ENSMUST00000164656 1043 ntBASIC5.97□□□□□ -1.45
P20040 Gm17022-201ENSMUST00000166415 922 ntBASIC5.97□□□□□ -1.45
P20040 Gm22569-201ENSMUST00000175545 124 ntBASIC5.97□□□□□ -1.45
P20040 Gm8245-201ENSMUST00000182434 987 ntBASIC5.97□□□□□ -1.45
P20040 Mir6987-201ENSMUST00000184789 73 ntBASIC5.97□□□□□ -1.45
P20040 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Gm29072-201ENSMUST00000191149 678 ntBASIC5.97□□□□□ -1.45
P20040 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC5.97□□□□□ -1.45
P20040 Gm44213-201ENSMUST00000204977 703 ntBASIC5.97□□□□□ -1.45
P20040 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
P20040 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC5.97□□□□□ -1.45
P20040 Gm6290-201ENSMUST00000207666 1158 ntBASIC5.97□□□□□ -1.45
P20040 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
P20040 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC5.97□□□□□ -1.45
P20040 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 AC124489.1-201ENSMUST00000225852 526 ntBASIC5.97□□□□□ -1.45
P20040 AC121542.2-201ENSMUST00000227529 400 ntBASIC5.97□□□□□ -1.45
P20040 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
P20040 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
P20040 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
P20040 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
P20040 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
P20040 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
P20040 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
P20040 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC5.97□□□□□ -1.45
P20040 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC5.97□□□□□ -1.45
P20040 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC5.97□□□□□ -1.45
P20040 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC5.97□□□□□ -1.45
P20040 AC130661.1-201ENSMUST00000218248 1680 ntBASIC5.97□□□□□ -1.45
P20040 Gm42613-201ENSMUST00000199975 1931 ntBASIC5.97□□□□□ -1.45
P20040 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Robo2-210ENSMUST00000226478 8059 ntBASIC5.97□□□□□ -1.45
P20040 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
P20040 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC5.97□□□□□ -1.45
P20040 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
P20040 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
P20040 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
P20040 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
P20040 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
P20040 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC5.96□□□□□ -1.46
P20040 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
P20040 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
P20040 Gm42668-201ENSMUST00000200747 2487 ntBASIC5.96□□□□□ -1.46
P20040 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
P20040 Gm22774-201ENSMUST00000102084 109 ntBASIC5.96□□□□□ -1.46
P20040 Mir697-201ENSMUST00000102316 109 ntBASIC5.96□□□□□ -1.46
P20040 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC5.96□□□□□ -1.46
P20040 Gm11903-201ENSMUST00000118958 727 ntBASIC5.96□□□□□ -1.46
P20040 Gm14631-201ENSMUST00000119067 594 ntBASIC5.96□□□□□ -1.46
P20040 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms