Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm25116-201ENSMUST00000157191 122 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 Gm5205-201ENSMUST00000182253 1003 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC5.39□□□□□ -1.55
Sdc1P18828 Gm28728-201ENSMUST00000189087 405 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 Gm37669-201ENSMUST00000192184 820 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 Gm37966-201ENSMUST00000193122 326 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC5.39□□□□□ -1.55
Sdc1P18828 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sdc1P18828 Gm44306-201ENSMUST00000203058 203 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 Gm43926-201ENSMUST00000203978 430 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC5.39□□□□□ -1.55
Sdc1P18828 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 Gm44911-201ENSMUST00000208436 1062 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 Gm8637-201ENSMUST00000212919 1085 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC5.39□□□□□ -1.55
Sdc1P18828 AC164978.2-201ENSMUST00000226645 857 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 Gm9761-201ENSMUST00000075650 492 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sdc1P18828 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sdc1P18828 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC5.39□□□□□ -1.55
Sdc1P18828 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Sdc1P18828 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.39□□□□□ -1.55
Sdc1P18828 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
Sdc1P18828 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
Sdc1P18828 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.39□□□□□ -1.55
Sdc1P18828 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sdc1P18828 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sdc1P18828 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Sdc1P18828 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sdc1P18828 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sdc1P18828 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sdc1P18828 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sdc1P18828 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Mir675-201ENSMUST00000102320 84 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sdc1P18828 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Gm25276-201ENSMUST00000104300 124 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sdc1P18828 Gm7091-201ENSMUST00000116438 586 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Mir669e-201ENSMUST00000117003 119 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Gm12874-201ENSMUST00000117190 913 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Gm14727-201ENSMUST00000118526 525 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Gm11925-201ENSMUST00000121375 535 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Gm14721-201ENSMUST00000121381 525 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Gm11933-201ENSMUST00000121550 375 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Gm25717-201ENSMUST00000158631 353 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Gm25025-201ENSMUST00000175018 111 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC5.38□□□□□ -1.55
Sdc1P18828 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Gm9167-201ENSMUST00000182469 962 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Mir7685-201ENSMUST00000183555 62 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Mir8120-201ENSMUST00000185035 139 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Gm29354-201ENSMUST00000187613 696 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC5.38□□□□□ -1.55
Sdc1P18828 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.38□□□□□ -1.55
Sdc1P18828 Gm36928-201ENSMUST00000192466 694 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Gm37325-201ENSMUST00000194971 694 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Rarres2-204ENSMUST00000204267 795 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Gm17918-201ENSMUST00000205315 574 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Sdc1P18828 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Sdc1P18828 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC5.38□□□□□ -1.55
Sdc1P18828 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC5.38□□□□□ -1.55
Sdc1P18828 AC100209.1-201ENSMUST00000225562 409 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 AC161537.1-202ENSMUST00000228450 868 ntBASIC5.38□□□□□ -1.55
Sdc1P18828 Eqtn-201ENSMUST00000030309 1074 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sdc1P18828 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.38□□□□□ -1.55
Sdc1P18828 Dppa5a-201ENSMUST00000071991 619 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms