Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm29759-201ENSMUST00000205860 327 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Gm19196-201ENSMUST00000209258 357 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC5.57□□□□□ -1.52
Cdx1P18111 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC5.57□□□□□ -1.52
Cdx1P18111 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC5.57□□□□□ -1.52
Cdx1P18111 AC147245.1-201ENSMUST00000223294 677 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 AC165106.1-201ENSMUST00000227580 408 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Cdx1P18111 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Cdx1P18111 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
Cdx1P18111 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Gm14935-201ENSMUST00000121528 1708 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Cdx1P18111 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cdx1P18111 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx1P18111 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx1P18111 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Cdx1P18111 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm42973-201ENSMUST00000197913 3200 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cdx1P18111 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Cdx1P18111 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Cdx1P18111 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx1P18111 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Cdx1P18111 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx1P18111 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cdx1P18111 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm23701-201ENSMUST00000103893 110 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Gm13469-201ENSMUST00000118231 350 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Gm13552-201ENSMUST00000118837 417 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm13680-201ENSMUST00000119790 793 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Gm12654-201ENSMUST00000120387 587 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Gm12459-201ENSMUST00000120659 356 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC5.56□□□□□ -1.52
Cdx1P18111 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm15275-201ENSMUST00000154752 347 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm11107-201ENSMUST00000165414 505 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Gm17973-201ENSMUST00000174509 520 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Gm25692-201ENSMUST00000175444 125 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm7763-201ENSMUST00000182220 1006 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Gm27542-201ENSMUST00000184184 256 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Cdx1P18111 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Cdx1P18111 Ighv1-21-201ENSMUST00000194856 351 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC5.56□□□□□ -1.52
Cdx1P18111 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm40853-201ENSMUST00000221342 582 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Mylf-ps-201ENSMUST00000222174 421 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 AC139568.1-201ENSMUST00000222878 486 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Gm9255-201ENSMUST00000223225 581 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx1P18111 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm5321-201ENSMUST00000072050 447 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm24411-201ENSMUST00000083428 131 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx1P18111 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx1P18111 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx1P18111 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.56□□□□□ -1.52
Cdx1P18111 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx1P18111 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx1P18111 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cdx1P18111 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm10601-201ENSMUST00000120436 1422 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.56□□□□□ -1.52
Cdx1P18111 Gm42595-201ENSMUST00000196771 1607 ntBASIC5.56□□□□□ -1.52
Cdx1P18111 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Cdx1P18111 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cdx1P18111 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms