Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC6.72□□□□□ -1.33
Lire1P11260 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Lire1P11260 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Lire1P11260 AC158981.1-201ENSMUST00000226943 1205 ntBASIC6.72□□□□□ -1.33
Lire1P11260 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Lire1P11260 Gm26442-201ENSMUST00000082588 153 ntBASIC6.72□□□□□ -1.33
Lire1P11260 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Lire1P11260 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.72□□□□□ -1.33
Lire1P11260 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Lire1P11260 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Lire1P11260 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Lire1P11260 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.72□□□□□ -1.33
Lire1P11260 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Gm44117-201ENSMUST00000204442 1758 ntBASIC6.72□□□□□ -1.33
Lire1P11260 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Lire1P11260 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.33
Lire1P11260 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.71□□□□□ -1.33
Lire1P11260 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Lire1P11260 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Lire1P11260 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Lire1P11260 Gm2223-201ENSMUST00000112099 1350 ntBASIC6.71□□□□□ -1.33
Lire1P11260 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Lire1P11260 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.33
Lire1P11260 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Lire1P11260 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Lire1P11260 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.71□□□□□ -1.33
Lire1P11260 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Lire1P11260 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Lire1P11260 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Lire1P11260 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
Lire1P11260 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Lire1P11260 Gm25344-201ENSMUST00000104503 132 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Lire1P11260 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
Lire1P11260 Defa-ps7-201ENSMUST00000117139 168 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm14610-201ENSMUST00000118358 966 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm14769-201ENSMUST00000118590 432 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm12955-201ENSMUST00000119689 957 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm13525-201ENSMUST00000120607 478 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm11474-201ENSMUST00000120814 277 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm14826-201ENSMUST00000121284 901 ntBASIC6.71□□□□□ -1.34
Lire1P11260 n-R5s47-201ENSMUST00000122516 119 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Lire1P11260 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC6.71□□□□□ -1.34
Lire1P11260 Mir1983-201ENSMUST00000157523 132 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm2976-201ENSMUST00000160362 513 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm8185-201ENSMUST00000160999 669 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm7651-201ENSMUST00000173398 901 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm3611-201ENSMUST00000173687 877 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.71□□□□□ -1.34
Lire1P11260 Gm22408-201ENSMUST00000174925 65 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm20111-201ENSMUST00000184830 319 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Mir6409-201ENSMUST00000184957 92 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Lire1P11260 Gm43906-201ENSMUST00000203194 906 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm6681-201ENSMUST00000205215 607 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm4587-201ENSMUST00000209135 637 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Lire1P11260 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC6.71□□□□□ -1.34
Lire1P11260 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm18586-201ENSMUST00000217265 518 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm2398-201ENSMUST00000218347 883 ntBASIC6.71□□□□□ -1.34
Lire1P11260 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.71□□□□□ -1.34
Lire1P11260 AC154747.4-201ENSMUST00000224802 903 ntBASIC6.71□□□□□ -1.34
Lire1P11260 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Lire1P11260 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Lire1P11260 Gm7808-201ENSMUST00000082002 387 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Gm6419-201ENSMUST00000097166 429 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Lire1P11260 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Lire1P11260 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Lire1P11260 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
Lire1P11260 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Lire1P11260 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Lire1P11260 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Lire1P11260 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Lire1P11260 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Lire1P11260 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Lire1P11260 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Lire1P11260 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Lire1P11260 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.71□□□□□ -1.34
Lire1P11260 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Lire1P11260 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Lire1P11260 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.71□□□□□ -1.34
Lire1P11260 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Lire1P11260 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.71□□□□□ -1.34
Lire1P11260 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Lire1P11260 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms