Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Chmp6P0C0A3 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC7.34□□□□□ -1.24
Chmp6P0C0A3 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.34□□□□□ -1.24
Chmp6P0C0A3 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm22256-201ENSMUST00000102291 107 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm14070-201ENSMUST00000120773 428 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm26321-201ENSMUST00000157740 242 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm23891-201ENSMUST00000158114 138 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm23762-201ENSMUST00000158348 106 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Mir6908-201ENSMUST00000184056 63 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm28801-201ENSMUST00000188761 449 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm37526-201ENSMUST00000194640 619 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm43906-201ENSMUST00000203194 906 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm45739-201ENSMUST00000213094 388 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm2774-201ENSMUST00000213650 1165 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm4042-201ENSMUST00000216946 637 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 AL713985.1-201ENSMUST00000219030 420 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 CT030175.1-201ENSMUST00000220822 408 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm9315-201ENSMUST00000222696 908 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 AC151730.1-201ENSMUST00000226106 448 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Gm45290-201ENSMUST00000211177 3890 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC7.33□□□□□ -1.24
Chmp6P0C0A3 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Gm42478-201ENSMUST00000199252 1467 ntBASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Gm9144-201ENSMUST00000101625 1008 ntBASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Gm12630-201ENSMUST00000121575 784 ntBASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Gm24545-201ENSMUST00000158651 85 ntBASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Gm43203-201ENSMUST00000200130 558 ntBASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.32□□□□□ -1.24
Chmp6P0C0A3 AL837512.1-201ENSMUST00000223914 1073 ntBASIC7.32□□□□□ -1.24
Chmp6P0C0A3 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.32□□□□□ -1.24
Chmp6P0C0A3 AC131033.1-201ENSMUST00000228223 279 ntBASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms