Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Gm18451-201ENSMUST00000196759 1719 ntBASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Gm25311-201ENSMUST00000104136 132 ntBASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Gm12778-201ENSMUST00000122341 333 ntBASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Mir1929-201ENSMUST00000158635 93 ntBASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Gm22132-201ENSMUST00000175316 100 ntBASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Gm27854-201ENSMUST00000175578 244 ntBASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Gm27653-201ENSMUST00000185037 136 ntBASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Gm27804-201ENSMUST00000185135 119 ntBASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Gm19340-201ENSMUST00000221995 345 ntBASIC5.68□□□□□ -1.5
Usf3B2RUQ2 AC138765.3-201ENSMUST00000227981 423 ntBASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Gm10221-201ENSMUST00000088299 309 ntBASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Gm37755-201ENSMUST00000195880 2179 ntBASIC5.68□□□□□ -1.5
Usf3B2RUQ2 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Gm6011-201ENSMUST00000211736 1796 ntBASIC5.68□□□□□ -1.5
Usf3B2RUQ2 AC139758.3-201ENSMUST00000226853 2704 ntBASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Usf3B2RUQ2 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm19024-201ENSMUST00000194681 1319 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 AC115760.1-201ENSMUST00000225160 1327 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm37347-201ENSMUST00000193969 3071 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm20121-201ENSMUST00000198547 1594 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm11821-201ENSMUST00000117335 979 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm14466-201ENSMUST00000119028 451 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm11796-201ENSMUST00000120208 972 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm15712-201ENSMUST00000120369 1156 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm26323-201ENSMUST00000157743 175 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm17217-201ENSMUST00000166613 469 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm42580-201ENSMUST00000197223 753 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm43382-201ENSMUST00000198954 838 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Dennd6a-203ENSMUST00000224111 2692 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 AC156645.1-201ENSMUST00000223066 5194 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 AC156636.2-201ENSMUST00000218845 4557 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm6679-201ENSMUST00000191467 1869 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 AC174797.5-201ENSMUST00000225055 1860 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm43789-201ENSMUST00000199275 2472 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm23756-201ENSMUST00000157582 114 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm16557-201ENSMUST00000159182 191 ntBASIC5.67□□□□□ -1.5
Usf3B2RUQ2 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms