Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm13798-201ENSMUST00000118285 139 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm11972-201ENSMUST00000118514 389 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm5135-201ENSMUST00000121100 573 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm13237-201ENSMUST00000122151 635 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm25969-201ENSMUST00000157166 132 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm25717-201ENSMUST00000158631 353 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm17047-201ENSMUST00000167709 430 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm24756-201ENSMUST00000177002 96 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm29470-201ENSMUST00000188007 696 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.35□□□□□ -1.39
Use1Q9CQ56 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm43147-201ENSMUST00000196944 542 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.35□□□□□ -1.39
Use1Q9CQ56 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 AC152940.1-201ENSMUST00000226504 139 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.35□□□□□ -1.39
Use1Q9CQ56 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Use1Q9CQ56 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Use1Q9CQ56 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Use1Q9CQ56 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Use1Q9CQ56 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Use1Q9CQ56 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.34□□□□□ -1.39
Use1Q9CQ56 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Use1Q9CQ56 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Use1Q9CQ56 Gm26416-201ENSMUST00000104280 134 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 Gm11926-201ENSMUST00000118520 430 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 Defa-ps10-201ENSMUST00000121649 171 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Use1Q9CQ56 Gm24647-201ENSMUST00000157112 113 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 Gm26183-201ENSMUST00000157685 139 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 Mir6337-201ENSMUST00000184194 105 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 Gm27507-201ENSMUST00000184199 93 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 Gm28894-201ENSMUST00000185214 615 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 Gm37383-201ENSMUST00000191750 745 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.34□□□□□ -1.39
Use1Q9CQ56 Gm37369-201ENSMUST00000194179 615 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Use1Q9CQ56 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 Gm6667-201ENSMUST00000217169 564 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Use1Q9CQ56 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Use1Q9CQ56 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Use1Q9CQ56 Gm6887-201ENSMUST00000080945 482 ntBASIC6.34□□□□□ -1.39
Use1Q9CQ56 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Use1Q9CQ56 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
Use1Q9CQ56 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Use1Q9CQ56 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Use1Q9CQ56 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Use1Q9CQ56 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Use1Q9CQ56 AC187103.1-201ENSMUST00000224641 1475 ntBASIC6.34□□□□□ -1.4
Use1Q9CQ56 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.33□□□□□ -1.4
Use1Q9CQ56 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
Use1Q9CQ56 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Use1Q9CQ56 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Use1Q9CQ56 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.33□□□□□ -1.4
Use1Q9CQ56 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Use1Q9CQ56 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.33□□□□□ -1.4
Use1Q9CQ56 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Use1Q9CQ56 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Use1Q9CQ56 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Use1Q9CQ56 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Use1Q9CQ56 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.33□□□□□ -1.4
Use1Q9CQ56 Gm23437-201ENSMUST00000104036 127 ntBASIC6.33□□□□□ -1.4
Use1Q9CQ56 Gm25724-201ENSMUST00000104531 117 ntBASIC6.33□□□□□ -1.4
Use1Q9CQ56 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Use1Q9CQ56 Gm12242-201ENSMUST00000118824 738 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms