Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm15125-201ENSMUST00000116185 800 ntBASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm13195-201ENSMUST00000117229 261 ntBASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm12024-201ENSMUST00000118819 1253 ntBASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm12477-201ENSMUST00000121221 571 ntBASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm21909-201ENSMUST00000178260 439 ntBASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm43476-201ENSMUST00000197873 405 ntBASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 AC109214.2-201ENSMUST00000220089 358 ntBASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm32300-201ENSMUST00000221735 515 ntBASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 AV026068-229ENSMUST00000225516 595 ntBASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 AC114916.1-201ENSMUST00000228465 494 ntBASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Olfr559-201ENSMUST00000084816 1022 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm7265-201ENSMUST00000192735 3502 ntBASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm37199-201ENSMUST00000193881 4065 ntBASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm37534-201ENSMUST00000194483 5222 ntBASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm43771-201ENSMUST00000202931 1578 ntBASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Gm7690-201ENSMUST00000190885 1399 ntBASIC7.08□□□□□ -1.28
Nkx6-1Q99MA9 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm37159-201ENSMUST00000192720 3605 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm29113-201ENSMUST00000185991 3432 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 9930024M15Rik-201ENSMUST00000214902 2584 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm12183-201ENSMUST00000120566 1848 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm37474-201ENSMUST00000194812 1814 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm25093-201ENSMUST00000103993 132 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm14931-201ENSMUST00000111079 253 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm11903-201ENSMUST00000118958 727 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm13486-201ENSMUST00000119910 282 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm16053-201ENSMUST00000120511 188 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm11474-201ENSMUST00000120814 277 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm3160-201ENSMUST00000128343 607 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm22143-201ENSMUST00000157401 203 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm16298-201ENSMUST00000161107 420 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm5511-201ENSMUST00000189380 802 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm36961-201ENSMUST00000191980 132 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm38373-201ENSMUST00000192042 288 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm7299-201ENSMUST00000194441 581 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm43287-201ENSMUST00000197747 600 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm18215-201ENSMUST00000204429 798 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Gm45008-201ENSMUST00000206420 493 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 AC153975.1-201ENSMUST00000220087 926 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 CT030238.3-201ENSMUST00000227352 875 ntBASIC7.07□□□□□ -1.28
Nkx6-1Q99MA9 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms